Rhizobium leguminosarum bv. trifolii CB782: RLEG12_12475
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Entry
RLEG12_12475 CDS
T03015
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rlu
Rhizobium leguminosarum bv. trifolii CB782
Pathway
rlu03420
Nucleotide excision repair
rlu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RLEG12_12475
03430 Mismatch repair
RLEG12_12475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlu03400
]
RLEG12_12475
Enzymes [BR:
rlu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RLEG12_12475
DNA repair and recombination proteins [BR:
rlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RLEG12_12475
MMR (mismatch excision repair)
Other MMR factors
RLEG12_12475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
AHG43990
LinkDB
All DBs
Position
complement(227744..229804)
Genome browser
AA seq
686 aa
AA seq
DB search
MYLEKLNPQQRMAVEHGTLTDGSHIAGPLLVIAGAGSGKTNTLAHRVAHLIVKGADPRRI
LLMTFSRRAAAEMARRVERICRDVLGANAGIMADALNWSGTFHGIGARLLRDYAQQIGLD
ADFTIHDREDSADLINLIRHDLGFSKTESRFPAKGTCLAIYSRAVNSETALEQVLRDAFP
WCAAWEKQLRELFACYVESKQAQNVLDYDDLLLYWAQMVGESVIAEDIGSRFDHVLVDEY
QDTNRLQASILMALKPGGQGLTVVGDDAQSIYSFRAATVRNILDFPGAFSPAADIVTLDR
NYRSTQPILAAANAVIDLASERFTKNLWTERQSAERPRLVTVRDEADQARYVADMVLDNR
EEGLTLKQQAVLFRASHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLATLRFAQNP
RDRVAGFRLMQILPGVGPSTAQKALDLMAEDASPLSALAEMPTPPRSGEDWTAFVSMLQE
LKSGKAGWPAEIELARQWYAPHLERLHEDAATRQADLLQLEQIAGGYASRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTRVFMLNVVDGCIPSDLAVGATAEIEEE
RRLLYVAMTRARDGLDLVVPQRFFTYGQNAQGDRHVYASRSRFIPATLLQFFEACSWPQV
KSQSAAQAQARQVRIDVGARMRGMWR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgaaaagctcaatccccagcagcgcatggccgtcgaacacggcacgctcacc
gacggcagccatattgccgggccgctgctggtcattgccggcgccggctcgggcaagacg
aacacgctggcgcaccgggtcgcccatctgatcgtcaagggcgccgatccccgccgcatt
ctgctgatgaccttctcgcgccgggccgcggccgaaatggcgcggcgcgtcgagcgcatc
tgccgcgatgtgttgggtgcgaatgccggcatcatggccgacgcgctcaattggtccggc
accttccacggcatcggcgcgcggctgttgcgcgactacgcccagcagatcggcctcgat
gccgatttcaccatccatgaccgcgaagacagcgccgatctgatcaacctcatccggcac
gatctcggtttctccaaaaccgaaagccggtttccggccaagggcacctgccttgccatc
tatagcagggcggtgaattcggaaaccgcgctcgagcaggtcctgcgcgacgcctttccc
tggtgcgcggcctgggagaaacagctgcgcgagcttttcgcctgttatgtcgagtcaaag
caggcccagaacgtgctcgattacgacgatctgctgctctactgggcgcagatggtcggc
gagagcgtgattgccgaggatatcggcagccgcttcgaccatgtgctggtcgacgaatat
caggacacaaaccggctgcaggcctcgatcctgatggcgctgaagcctggtggccagggg
ctgaccgtcgtcggcgacgatgcccaatcgatctattcgttccgtgcagcgacggtgcgc
aatattctcgattttcccggcgccttcagcccggctgccgatatcgtcacgctcgaccgc
aattaccgctcgacgcagccgatcctggcggcggccaacgccgtcatcgatctcgcttcg
gagcgtttcaccaagaacctgtggaccgagcggcaatcggccgagcggccgcggctcgtc
acggtgcgcgacgaggccgaccaggcgcgttatgtcgccgacatggtgctcgacaatcgc
gaggagggcctgacgctcaagcagcaggccgtgctgttccgcgcctcgcatcacagcggg
ccgctggaggtcgagttgacccggcgcaacattcccttcgtcaagttcggcggcttaaag
tttctcgacagtgcgcatgtcaaggacatgctggctacgctgcgcttcgcgcagaacccg
cgcgaccgggtggcgggtttccggctgatgcagatcctgcccggcgtcgggccgtcgacg
gcgcagaaggcgctcgacctgatggccgaggatgccagcccgctatcggcgctggccgaa
atgccgacgccgccacgctccggcgaggactggactgcattcgtttcgatgctgcaggag
ctgaaatccggcaaggccggctggccggcggaaatcgaactggcgcggcaatggtacgcg
ccgcatctggaacggctgcatgaagacgccgcgacacgccaggccgatctcttacagctc
gagcagattgccggcggttatgcctcgcgcgaacgttttctcaccgagctcaccctcgat
ccgccggatgcgaccagcgaccaggccggcgtgccgctgctcgatgaggactatctgatc
ctgtccaccatccattccgccaagggccaggaatggacaagggtcttcatgctgaatgtc
gtcgatggctgcattccgagcgatctcgccgtcggcgccaccgccgaaatcgaagaggaa
cgccggctgctctatgtggcgatgacacgtgcgcgggacggtctcgatctggtcgtgccg
caacgctttttcacctacgggcagaacgcgcagggcgaccggcacgtttacgcctcgcgc
agccgcttcattccggcgacgctgctgcagttcttcgaagcctgcagctggccgcaggtg
aaatcgcagtccgccgcgcaagcccaggcgcggcaggtgcgtatcgatgtcggcgcccgc
atgcgcggcatgtggcgatag
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