Rhizobium leguminosarum bv. trifolii CB782: RLEG12_16330
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Entry
RLEG12_16330 CDS
T03015
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rlu
Rhizobium leguminosarum bv. trifolii CB782
Pathway
rlu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rlu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RLEG12_16330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlu03021
]
RLEG12_16330
03400 DNA repair and recombination proteins [BR:
rlu03400
]
RLEG12_16330
Enzymes [BR:
rlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RLEG12_16330
Transcription machinery [BR:
rlu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RLEG12_16330
DNA repair and recombination proteins [BR:
rlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RLEG12_16330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Coatomer_E
Motif
Other DBs
NCBI-ProteinID:
AHG44700
LinkDB
All DBs
Position
1000815..1001219
Genome browser
AA seq
134 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLASHRARLISQGASITIDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPASMIAAGGVAAADSEEQDDLPETITFDQMSEEELLA
GIEGLVPPEKSDDY
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcacagttgaagattgcatcgacaaggtggagaaccgcttcgagctggtt
ctgctcgccagccaccgcgcccggctgatttcccagggcgcctcgatcaccatcgatcgc
gacaacgataagaatccggtcgtggcgctccgcgaaatcgccgacgaaacgctttcgccc
gatgacctcaaggaagatctgatccattcgctgcagaagcatgtcgaagtcgacgagccc
gaacccgatccggccagcatgatcgccgccggcggtgtcgctgcggccgacagcgaggag
caggacgacctgcccgaaacgatcacgttcgaccagatgtcggaagaagagctgcttgcc
ggcatcgaaggcctggtgccgcctgagaagagcgacgactactaa
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