KEGG   Rhizobium leguminosarum bv. trifolii CB782: RLEG12_23930
Entry
RLEG12_23930      CDS       T03015                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
rlu  Rhizobium leguminosarum bv. trifolii CB782
Pathway
rlu03420  Nucleotide excision repair
rlu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rlu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RLEG12_23930
   03430 Mismatch repair
    RLEG12_23930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rlu03400]
    RLEG12_23930
Enzymes [BR:rlu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RLEG12_23930
DNA repair and recombination proteins [BR:rlu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RLEG12_23930
   MMR (mismatch excision repair)
    Other MMR factors
     RLEG12_23930
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 PcrA_UvrD_tudor AAA_11 DUF4420
Other DBs
NCBI-ProteinID: AHG46107
LinkDB
Position
2471235..2473712
AA seq 825 aa
MSNSFDDIPFFDEEPGEMARKPQPPAAPAGRPPATGGIAARAMAARDGGSRPDYLAGLNP
EQTEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMKE
RIALLVGGAVEGMPWLGTFHSIGVKLLRRHGELVGLRSDFTILDTDDVVRLIKQLIQAEG
LDDKRWPAKQFAGMIDTWKNKGLAPADIPEGDARAFANGRGRDLYFAYQARLTTLNACDF
GDLLMHPIAIFRKNPDLLKEYHGRFRYILVDEYQDTNTAQYMWLRLLAQRAKGEQQNVCC
VGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRLG
KTLFTDRSDPDDVRVQVHASWDSEEEARAIGEEIEQLQRGKHLLNDMAILVRASFQMREF
EDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQAADDLAFERIINTPKRGLGDTTV
RALHDYARARDIPMLAAAADIIETDELKPKARKALFDVIQSFRRWQELLENTPHTELAEQ
ILEESGYTDMWKNDKSAEAPGRLENLKELIRSMESFESMRGFLEHVSLVMDAETNENLDA
VSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKHRCH
IWFVSNRRIHGLWQSTLPSRFLDELPETHVEVAEMEQSYGGYGRGGYGQSRFDKAEPFAN
SYSTPGWKRAQANKTDATRDNWGSRSGHAVERIGYGESGPKGRTIEGELVAKSTSSEPSK
FTLGDRVFHMKFGNGNITGIEGNKLTIEFDRAGQKRVLDGFVERV
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgagcaatagtttcgacgatatccccttcttcgacgaagagccgggcgagatggcgcgc
aagccgcagccgcctgccgcgcccgccggaaggccacccgccaccggtggcattgccgcc
cgcgcgatggcggcccgcgacggtggcagccggccggattatctcgccggtctgaacccc
gagcagaccgaagccgtcgaaactttggaaggccctgtcctcgtgcttgccggtgccggc
actggcaagacgcgcgtgctgacgacgcgcattgcccatatcctcaataccggccgtgcc
ttcccatcacagatcctcgccgtcaccttcaccaacaaggccgcccgcgagatgaaggag
cgcatcgcgctactggtcggcggcgccgtcgaaggcatgccttggctcggcacattccac
tcgatcggcgtcaaacttctgcgccgccacggcgagctcgtcggcctgcgttccgatttc
accattctcgataccgacgacgtcgtccgcctgatcaagcagttgatccaggccgaaggc
ctcgacgacaagcgctggccagccaagcagttcgccggcatgatcgacacctggaaaaac
aagggtctcgcgccggccgatatccccgagggcgacgcccgcgccttcgccaatggccgc
ggccgcgacctttatttcgcctatcaggcgcggctgaccacgctgaacgcctgcgatttc
ggcgacctgctgatgcatccgatcgcgatcttccgcaagaacccggatctcctgaaggaa
tatcacggccgcttccgctatatcctcgtcgacgagtaccaggacaccaacaccgcccaa
tatatgtggctccggcttctcgcccagcgcgccaagggagagcagcagaatgtctgctgc
gtcggcgacgacgaccagtcgatctatggctggcgcggggccgaagtcgacaacatcctg
cgcttcgaaaaggattttcccggcgccaaggtcatcaagctcgagcgcaactaccgctcg
accgaacatatcctcggggccgccgcccatctgatcgcccataatgaagggcggcttggc
aagacgctgttcaccgaccgttccgatcccgacgacgtcagggtgcaggtccacgcctcg
tgggattcggaggaggaagcccgcgccatcggcgaggaaatcgagcagcttcaacgcggc
aagcatctgctcaacgacatggcgatcctcgtgcgcgcctcctttcagatgcgcgagttc
gaagaccgcttcgtcactctcggcctcaactaccgcgtcatcggcggcccgcgcttctat
gagcgcctcgaaatccgcgatgccatggcctatttccgcctcgtcgcccaagccgccgat
gatctcgccttcgagcgcatcatcaacacgccgaagcgcggcctcggcgacacgacggtg
cgtgcgctgcatgactatgcccgggcccgcgatatcccgatgctggcggcggccgccgac
atcatcgagacggacgagctgaagccgaaggcgcgaaaagccctcttcgacgtgattcaa
tctttccgccgatggcaggaactgcttgaaaacacgccgcataccgaacttgccgagcag
atcctcgaagagtccggctataccgatatgtggaagaacgacaagagcgccgaagcgccc
ggccgcctcgagaacctcaaggaactgatccgctcgatggaaagtttcgagtcgatgcgc
ggctttctcgaacacgtctctcttgtcatggatgccgagaccaacgagaatctcgatgcc
gtctcgatcatgacgctgcattcggcaaagggtcttgagttcgacacggtctttctgccc
ggctgggaggaaggcctcttcccgcaccagcgctcgctcgatgagagcggccgcgccgga
ctggaggaagaacgtcgcctcgcctatgtcggcatcacccgcgccaagcaccgctgccac
atctggttcgtctccaaccgccgcatccatggcctctggcaatcgaccttgccctcgcgc
ttcctcgacgaactgccggaaacccatgtcgaggtcgccgaaatggagcagagctacggc
ggttacggccgtggcggctacggccagtcccgcttcgacaaggcggagccttttgccaat
tcctactccacccccggctggaaacgcgcccaggccaacaagaccgacgccacgcgcgac
aattggggcagccgctccggccacgccgtcgaacgcatcggttatggcgaaagcggcccg
aagggacgcacaattgaaggcgaacttgtagcgaaatccacctcgtcggaaccgtcgaag
ttcaccctcggcgaccgcgtattccacatgaagttcggcaacggcaatatcaccggcata
gaaggcaacaaactgacgatcgagttcgaccgcgccgggcagaagcgggtgctggacggg
ttcgtcgagcgcgtgtga

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