Rhizobium leguminosarum bv. trifolii CB782: RLEG12_27075
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Entry
RLEG12_27075 CDS
T03015
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rlu
Rhizobium leguminosarum bv. trifolii CB782
Pathway
rlu00330
Arginine and proline metabolism
rlu00480
Glutathione metabolism
rlu01100
Metabolic pathways
rlu01110
Biosynthesis of secondary metabolites
rlu04148
Efferocytosis
Module
rlu_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rlu00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RLEG12_27075
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RLEG12_27075
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
RLEG12_27075
Enzymes [BR:
rlu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
RLEG12_27075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AHG46678
LinkDB
All DBs
Position
complement(3103795..3106158)
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AA seq
787 aa
AA seq
DB search
MIPRDVKSPTVAIPFHKMLKIVAIIDRDNSQAQELVSRITAQGFEVEQRDAYSADVSEDA
DVGAYIGSVEGGRLPSARSFLRSVRDIGFRTPIWAMADTLTIADMDVVEMAGEVDGFVYL
GQQTPTFYAKQIVSSAVNYGKSLLPPFFGGMMAYDGEANIAFDCPGHQGGQFYRKSPAGQ
LFFKYFGESIFRNDLCNADVDLGDLLIHEGPAVEAQKQAARIFGADRTYFILNGTSTSNK
VVANAVLRSGDLVLFDRNNHKSLHQGALVQAGAIPIYLPTARNSFGMIGAVDWAAWDEGL
LRRKIEEHPLVTDKSRAKAERPFRLACIQLATYDGTIYNVRQVMEKIGHLCDYVLWDEAW
IGYNAFHPLFDGHSPMRLKDLRPDMPGLFSTQSVHKQGAGFSQASQIHKRDEHISGQRRF
VEHKRFNESLLMNVSTSPFYPLFASLDVNAKVHEGKAGEMLWDRCIELGIEVRKKLRGFV
GHYETKAASTEEQWFFDPFVPDRVSVAGSKHTGDLADTKWEDIPTDVLKREQQCWRFDPE
AKWHGYSGYAPGYTMVDPNKLTLLTPGIDRTTGEYREFGIPATVVANYLREQRVVAEKCD
LNSLLFLLTPAEDESKLNTLVAKLVKFKNLWDRDAPLPEVLPTVFAANRERYAGYTVRQV
CKEMHSFYRSAGVKDLQRLCFRSESFPEPAIAPKQAYEALVANNVDYVPLAEAAGRISAT
LALIYPPGIGVIVPGERWDDRARPMRDYFLAFEESFNRFPGFNYEVQGVFQERIDGRIKF
YTYVVRE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcgtgatgtgaagtctccgacggtcgccatacccttccacaagatgctgaag
atcgtcgcgatcatagaccgcgacaattcccaggctcaggaactggtgtcacggatcacc
gcccagggcttcgaggtagagcagcgcgacgcctactcagccgacgtgtccgaagatgcg
gacgttggcgcctatatcggctcggtcgagggcgggcggcttccttcggcgcgcagcttc
cttcgttccgtcagagacatcggcttccgtacgccaatctgggcgatggccgatacgttg
acgattgcggatatggatgtcgtcgagatggccggcgaggtggatggtttcgtctatctc
ggccagcagacgccgaccttctatgccaagcagatcgtgtccagtgcggtcaattacggc
aagtcgctgctaccgcccttcttcggcggcatgatggcctatgacggcgaggccaacatc
gccttcgattgcccagggcatcagggcggccagttctatcggaaatcgccggccggccag
ctcttcttcaaatatttcggtgagagcatcttccgaaacgacctatgcaatgccgacgtc
gatctcggcgatctcctgattcacgaaggtcctgccgtcgaagcccaaaagcaggcggcc
cgcatcttcggagcggaccgcacctatttcatcctgaacggcacgagcacctccaacaag
gttgtcgccaatgcggtgctgcgcagcggcgatctcgtgctcttcgatcgcaacaatcac
aaatccctgcatcagggcgctctcgtgcaggccggcgccatcccgatctatctgccgacc
gcccgcaattccttcggcatgatcggcgccgtcgactgggcggcctgggacgaaggcttg
ctgcggcgaaagatagaggaacatccgctcgtcacggacaagagccgcgccaaggcggag
aggcctttccgtctcgcttgcatccagctcgcgacctatgacggcacgatctacaatgtc
cgccaagtcatggagaagatcggccatctctgcgactacgtgctctgggacgaggcctgg
atcggctacaatgccttccatccgctgtttgatggccacagcccgatgcgtcttaaagac
ctgcgaccggatatgccggggctgttttccacccagtcggtccacaagcaaggcgccggt
ttctcgcaggcctcacagatccacaagcgggacgaacatatcagcggccagcgccgcttc
gtcgaacacaagcgcttcaatgaatcgctgctgatgaatgtctcgacctctcccttctat
ccgcttttcgcctcgctcgacgtcaacgccaaggtgcatgagggcaaggccggcgagatg
ctctgggatcgctgtatcgaactcgggatcgaggttcgcaagaagctgcgcggtttcgtg
ggacattatgaaaccaaagccgcaagcaccgaggagcagtggttcttcgatcccttcgtg
ccggacagggtctcggtcgcgggctcgaaacatacgggcgatcttgccgataccaaatgg
gaggatatcccgaccgatgtgctgaagcgcgagcagcaatgctggcggttcgatccggag
gcgaagtggcatggctattctggttatgcgcccggctatactatggtcgatcccaacaag
ctcacactgctcaccccgggcatcgaccggacgaccggcgaatatcgtgagttcggcatt
ccggcgactgttgtcgcaaactatctgcgcgaacagcgggtggtggcggaaaaatgcgat
ctgaacagcctgctcttcctgctgacgccggcagaggacgaaagcaagctgaatacgctg
gtcgccaagctggtgaagttcaagaacctctgggatcgcgatgcgccattgccggaggtg
ctgccgaccgtatttgcggccaaccgcgaacgctatgcaggctacacggttcggcaggtc
tgcaaggagatgcattccttctatcgtagtgccggcgtcaaggacttgcagcggctctgc
ttccgctccgagagttttccggagccggcgatcgcaccgaaacaggcctatgaagcgctg
gtcgccaacaatgtcgactacgtgccgctcgccgaggctgccggccgcatttcggcgacg
ctggcgctgatttatccaccgggtatcggtgtcatagtgcccggagagcgctgggacgac
cgggcgcggccgatgcgggactatttcctggccttcgaggaatccttcaaccgcttcccg
ggattcaattatgaggtccagggcgtgttccaggaacggatcgatgggcggatcaagttc
tatacgtatgtcgtgcgcgagtag
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