Rhizobium leguminosarum bv. trifolii CB782: RLEG12_27290
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Entry
RLEG12_27290 CDS
T03015
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rlu
Rhizobium leguminosarum bv. trifolii CB782
Pathway
rlu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rlu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RLEG12_27290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rlu02000
]
RLEG12_27290
Transporters [BR:
rlu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RLEG12_27290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA
SMC_N
AAA_22
Mg_chelatase
AAA_29
SRP54
AAA_16
AAA_30
AAA_25
AAA_23
AAA_19
Rad17
AAA_5
nSTAND_NTPase5
TOBE_2
PRK
AAA_28
AAA_27
NACHT
AAA_14
TsaE
RsgA_GTPase
RNA_helicase
ORC-CDC6-like
nSTAND1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHG46713
LinkDB
All DBs
Position
3151724..3152749
Genome browser
AA seq
341 aa
AA seq
DB search
MSDAYLQLDKLTLAYGDTVAVGNLDLAIGKGELVALLGPSGCGKTTTMRAIAGLLTPASG
RIRLDGADITRVSANKRAIGLVFQSYALFPHLTVYENVAFGLRLKGISGADLDARVGGGL
KSVGLTTFAGRKPAELSGGQQQRVALARSMVMEPKLLLLDEPLSNLDARLRLEMRAELQR
VQKETGVTMIFVTHDQVEALALADRIVVMLNGGIEQIGTPEEIYNDPTSAFVADFVGFEN
VFALSDGKLATPNGPVALSGPAPKAAAGLAWRPRMVTLGSGPFQGTVRGTSFAGNTREYL
LDTPLGPIKAEIDASLPPHEIGSALAFDLPVAGAANLKRFG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcctatcttcaacttgacaagctgacgctcgcctatggcgatacggtcgcg
gtcggaaatctcgacctcgcaatcggcaaaggcgaactcgtcgcccttctcggcccctcc
ggctgcggcaagacgaccacgatgcgcgccatcgccggtctgctgacccccgcttccggc
cgcatccggctcgacggcgccgatatcacccgcgtctccgccaacaaacgcgccatcggc
ctggtcttccaatcctatgcactctttccgcatctgacggtctacgagaacgtcgccttc
ggcctgcgtctcaagggcatctcgggcgccgatctcgatgcccgcgtcggcggcggcctg
aaatccgtcgggctcaccactttcgccggccgcaaacccgccgaactctccggcggccag
cagcaacgcgtggcccttgcccgctcgatggtgatggagccgaaactgctgctgctcgac
gagccgctctccaatctcgacgcccgcctgcgcctcgagatgcgcgcagagctgcagcgt
gtccagaaggagactggcgtcaccatgatcttcgtcacccacgaccaggtcgaggccctg
gcgctcgccgaccgcatcgtcgtcatgctgaatggcggcatcgaacagatcggcacgccg
gaagagatctacaacgaccccacctccgccttcgtcgccgatttcgtcggcttcgagaat
gtctttgcgctgagtgatggaaagctcgcgacgccgaatggcccggtagcactttccggc
ccggcgccgaaagctgcggccggcctcgcctggcgcccgcgcatggtgaccctcggttcc
ggtccttttcagggcaccgtgcgcggcacatctttcgccggcaacacccgcgaatatctt
ctcgatacgccgcttgggcccatcaaggccgaaatcgacgcaagcctgccgccgcacgag
atcggcagcgcgcttgccttcgacctgccggttgccggcgcggccaacctcaaacggttc
gggtga
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