Rhizobium leguminosarum bv. trifolii CB782: RLEG12_28355
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Entry
RLEG12_28355 CDS
T03015
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rlu
Rhizobium leguminosarum bv. trifolii CB782
Pathway
rlu00330
Arginine and proline metabolism
rlu00480
Glutathione metabolism
rlu01100
Metabolic pathways
rlu01110
Biosynthesis of secondary metabolites
rlu04148
Efferocytosis
Module
rlu_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rlu00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RLEG12_28355
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RLEG12_28355
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
RLEG12_28355
Enzymes [BR:
rlu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
RLEG12_28355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHG46919
LinkDB
All DBs
Position
complement(3375857..3376990)
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AA seq
377 aa
AA seq
DB search
MTTQRIRDFLATRRPDGPCLVVDLDVISDNFHAFRHAMPDSAIYYAVKANPAPEVLKLLA
GLGSNFDCASVAEIEMALDAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEK
ISRAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLQSYGVSFHVGSQ
MTKVDAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALR
THFGNQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDE
AIRYPIRTEHDGDEMEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTT
YSAVAFNGFEPLKAYVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcgcatccgcgactttctcgccacccgacgtcccgacggtccctgcctc
gtggttgacctcgatgtcatcagtgacaattttcacgccttccgtcacgccatgccggac
agcgccatctactacgccgtcaaggccaacccggcccctgaagtgttgaagctgcttgca
ggcctcggctccaatttcgattgcgcatccgttgccgaaatcgaaatggcgctcgacgcc
ggtgcgactgcagctcgcatctccttcggcaatacgatcaagaaggaacgcgacgttgct
cgcgcgcatgcgctcggcgtcagcctttttgcggtcgacagccacgaggaagtcgagaag
atctcgcgcgccgctcccggcgcccgcgtcttctgccgcgtgctgaccgatggcgaaggt
gctgaatggccgctgtcgcgcaagtttggctgcgtcccgcagatggccgtcgacgttctc
gtctacgcccatcagctcggcctgcagtcctacggcgtctcgttccatgtcggttcgcag
atgaccaaggtcgatgcctgggattcagcactcgccgatgccaagcgcgtcttcgtatcg
ctggccaagcagggcatccacctgcagatggtcaacatgggcggcggcttcccgaccaag
tatctgcgcgacgttccgtcggcagaagcttacggcaagtcgatctaccaggcgctgcgc
acgcatttcggcaaccagatcccgcagacgatcatcgagccgggccgcggcatggtcggc
aatgccggcgtcatcaaggctgaggtcgtgctgatctcgaagaagtcggacaatgacgat
gcgcgctgggtattcctcgacatcggcaagttcggcggcctcgccgaaacgatggacgaa
gccatccgctatccgatccgcacggagcacgacggcgacgagatggagccctgcgtcatc
gccggcccgacctgcgattcagccgacgtgctttacgagaagaacctctatccgctgccg
atctctctttcgatcggcgacgaggtgctgatcgaaggcaccggcgcctatacgacgacc
tattcggcagtcgctttcaacggtttcgaaccgctgaaggcctacgtcatctaa
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