Rhizobium leguminosarum bv. trifolii CB782: RLEG12_32090
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Entry
RLEG12_32090 CDS
T03015
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rlu
Rhizobium leguminosarum bv. trifolii CB782
Pathway
rlu03030
DNA replication
rlu03410
Base excision repair
rlu03420
Nucleotide excision repair
rlu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RLEG12_32090
03410 Base excision repair
RLEG12_32090
03420 Nucleotide excision repair
RLEG12_32090
03440 Homologous recombination
RLEG12_32090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlu03032
]
RLEG12_32090
03400 DNA repair and recombination proteins [BR:
rlu03400
]
RLEG12_32090
Enzymes [BR:
rlu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RLEG12_32090
DNA replication proteins [BR:
rlu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RLEG12_32090
DNA repair and recombination proteins [BR:
rlu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RLEG12_32090
NER (nucleotide excision repair)
GGR (global genome repair) factors
RLEG12_32090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
HHH_2
HHH
IMS_HHH
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AHG47623
LinkDB
All DBs
Position
4163678..4166677
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLPIGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEATGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILANI
DMAKLSRDLVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKTMEFTSLTRRVAEVCDCDAN
AIEPAIVQIEWGKSAHGPDLDAAEPAPVAGGIPEVSGASVPVPQRAKAKAAVEGAFSPAD
LAKARAEAFAALPFDHSAYVTIRDLATLDRWIADARATGLVAFDTETTSLDAMQAELVGF
SMAIADNTADPTGTKIRAAYIPLAHKNGVGDLLGGGLADNQIPMRDALPRLKALLEDAAV
LKVAQNLKYDYLLMKRYGVETRSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKD
VAGSGKANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLAAAGLTSVYERLERPLLPV
LARMEARGITVDRQILSRLSGELAQGAARLEDEIYVLAGERFNIGSPKQLGDILFGKMGL
AGGSKTKTGQWSTSAQVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYVHAETKRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLA
HVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSV
RAFNERAAINAPIQGSAADVIRRAMIKMEPALAEVGLGDRVRMLLQVHDELIFEVEDEDV
EKAMPVIVSVMENATMPALEMRVPLRVDARAASNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgacggttccggattcatcttccgggcgttt
catgcactgccaccgctgacccgcaagaccgacggcctgccgatcggcgctgtttccggt
ttctgcaacatgctgtggaaattgttgcgggatgcgcgcaataccgatgtcggcgtgacg
ccgacacaccttgccgtcatcttcgactattccgccaagactttccgcaaggatctctat
gacgcctataaggcgaaccgctccgccccgccggaagagctcattccgcaattcggcctg
atccgcgaggcgacccgcgccttcaatctgccctgcatcgagaccgaaggcttcgaggcc
gacgatatcatcgccacctacgcccgccaggccgaggcgacgggcgccgatgtcaccatc
gtctcttccgacaaggacctgatgcagctcgtcagcccgaatgtccatatgtatgacagc
atgaaggacaagcagatcggcattcccgatgtcatcgagaaatggggcgtgccgccggaa
aagatgatcgacctgcaggcgatgaccggcgattccgtcgacaatgttcccggcattccc
ggcatcggcccgaaaaccgccgcccagctgctcgaagaatatggcgatctcgacacgctg
ctcgaacgcgccaccgagatcaagcaggtcaagcgccgcgaaacgatcctcgccaatatc
gatatggcaaaactctcgcgcgacctcgttcggctgcgcaccgacgtgccgctcgatctc
gatctcgacgcactggtgctggagccgcagaacggcccgaagctgatcggcttcttgaag
acgatggaattcacgtcgctgacccgccgtgtcgccgaagtctgcgattgtgatgcaaac
gccatcgaaccggcgatcgtccagatcgaatggggcaagagtgcccacggccctgatctc
gatgcggccgagccggccccggttgccggcggcatccccgaggtctctggcgcctcggtg
ccggtgccgcagcgtgcgaaggccaaggccgccgtcgaaggcgccttttctcccgccgat
ctggccaaggcgcgagctgaggcctttgcggcgctgcccttcgatcattcggcctatgtg
acgatccgcgatctggccacactcgaccgctggatcgccgatgcgcgcgctaccggcctc
gttgctttcgacaccgaaaccacatcactggatgcgatgcaggccgagcttgtcggcttc
tcgatggcaatcgccgacaatacggccgacccgacaggcacgaaaatccgcgccgcctat
ataccgctcgcgcacaagaacggcgtcggcgatctgctcggcggcggccttgccgacaac
cagatcccgatgcgcgatgccttgccgcggctgaaggccttgctggaggacgcggctgtt
ctcaaggtcgcccagaacctcaaatacgactacctgctgatgaagcgctacggcgtcgaa
accaggagtttcgacgacacgatgctgatttcctacgtgctcgacgccggcactggcgcc
cacggcatggacccgctctcggaaaaattcctcggccatacgccgatcccctacaaggat
gtggcgggcagcggcaaggcgaacgtcaccttcgatctggtcgatatcgaccgcgccacc
cattatgcggctgaagatgccgacgtgacgctgcggctgtggctggtgctgaagccgcgg
ctggcggcggcagggctgaccagcgtctatgaacggctggagcggccgctgctgccggtg
ctggcgcggatggaagcgcgcggcatcaccgtcgaccggcagatcctgtcgcgcctgtcg
ggcgagttggcccagggcgccgccaggctggaagacgagatctatgtgctggccggcgag
cgcttcaatatcggctcaccgaagcagctcggcgatatcctgttcggcaagatgggcctt
gccggcggcagcaagacgaaaaccgggcaatggtcgacctccgcgcaggtgctcgaggat
ctggccgccgccggtttcgagctgccccgcaagatcgtcgactggcgccagcttaccaaa
ctgaaatccacctataccgacgcgcttcccggctatgtccatgcggagaccaagcgggtc
catacctcctattctctggcatcgacgacgacggggcgcctgtcctcctccgagccaaac
ctgcagaacattccggtgcgcaccgccgaaggccgcaagatccgcaccgccttcatctcg
acgcctggccataagctgatttctgccgattacagccagatcgaactgcgcgtgcttgcc
catgtggccgagatcccgcagctgaccaaggccttcgaggatggcgtcgacattcacgcc
atgaccgcgtcggaaatgttcggcgtgcctgttgaaggcatgccgggcgaagtgcgccgc
cgcgccaaggcaatcaattttggcatcatctacggcatctcggccttcggccttgccaac
cagctgtcgatcgagcgttcggaggccggcgattacatcaagaagtatttcgagcgtttt
cctggcatccgcgactatatggaaagccgcaaggccatggcgcgcgacaagggttatgtc
gagacgatcttcggacggcgaatcaactatccggaaatccgctcgtccaacccatccgtg
cgcgccttcaacgagcgtgcggcgatcaacgcgccgatccagggctcggccgccgacgtc
attcgccgggcgatgatcaagatggagccggcactggctgaagtcggtcttggcgatcgc
gtccgcatgctgctgcaggtgcatgacgaactcatcttcgaagtcgaggacgaggatgtc
gagaaggcaatgccggttatcgtttcggtcatggaaaacgccaccatgccggcgctcgaa
atgcgcgtgccgctcagggtcgacgcgcgcgccgccagcaattgggacgaggcgcattaa
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