Rhizobium laguerreae: RlegWSM1455_01205
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Entry
RlegWSM1455_01205 CDS
T08814
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rlw
Rhizobium laguerreae
Pathway
rlw03420
Nucleotide excision repair
rlw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rlw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RlegWSM1455_01205
03430 Mismatch repair
RlegWSM1455_01205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlw03400
]
RlegWSM1455_01205
Enzymes [BR:
rlw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RlegWSM1455_01205
DNA repair and recombination proteins [BR:
rlw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RlegWSM1455_01205
MMR (mismatch excision repair)
Other MMR factors
RlegWSM1455_01205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UFW64707
LinkDB
All DBs
Position
complement(240819..242876)
Genome browser
AA seq
685 aa
AA seq
DB search
MYLEKLNPQQRMAVEHGTLIDGSHIAGPLLVIAGAGSGKTNTLAHRVAHLIVKGADPRRI
LLMTFSRRAAAEMARRVERICRDVLGANAGVMADALSWSGTFHGIGARLLRDYAEQIGLD
PGFTIHDREDSADLMNLIRHDLGFSKTESRFPTKGTCLAIYSRAVNSETALDLVLRDVFP
WCATWEKQLRELFASYVEAKQSQNVLDYDDLLLYWAQMVGEAMIAEDIGSRFDHVLVDEY
QDTNRLQASILLALKPQGQGLTVVGDDAQSIYSFRAATIRNILDFPAAFSPAANIVTLDR
NYRSTQPILAAANAVIDLASERFTKNLWTERQSSERPRLVTVRDEAEQARYITDMVLDNR
EEGVTLKQQAVLFRASHHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAALRFAQNP
RDRVAGFRLMQILRGVGPSTAQKALDLMAEDASPISALAAMPAPPRSGEDWTDFVAMLQE
MKSGKAGWPAEIGLARQWYAPHLERLHEDATTRQADLLQLEQIASGYASRERFLTELTLD
PPDATSDQAGVPLLDEDYLILSTIHSAKGQEWTKVFMLNVVDGCIPSDLAVGTTAEIEEE
RRLLYVAMTRARDGLDLVVPQRFFTYGQNSQGDRHVYASRSRFIPATLLQFFEACNWPQG
KSEAAQAQARQVRIDVGARMRGMWR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcgaaaagctcaatccgcagcagcgcatggccgtcgagcacggcacgctcatc
gacggcagccatattgccgggccgctgctggtcattgccggtgccggctccggcaagacg
aataccttggcgcatcgggtcgcccatctgatcgtcaaaggcgccgatccccgccgcatc
ctgctgatgaccttctcgcgccgggcagccgccgagatggcgcggcgtgtcgagcgcatc
tgccgcgatgtgcttggtgcgaatgccggcgtcatggcggatgcgctttcctggtccggc
accttccacggcatcggcgcgcggctgttgcgcgactatgcggagcagatcggtctcgat
cctgggtttaccatccacgaccgcgaagacagcgccgatctgatgaacctgatccggcac
gacctcggcttctcgaagacggaaagccgctttcccaccaaaggcacctgccttgccatc
tattccagggcggtgaattccgaaaccgcgctcgacctggtgctgcgcgacgtctttccc
tggtgcgcgacgtgggagaaacagctgcgcgaacttttcgccagctatgtcgaggccaag
cagagccagaacgtgctcgattacgacgacctgctgctctactgggcgcagatggtcggc
gaagcgatgattgccgaggatatcggcagccgcttcgaccatgtgctggtcgacgaatat
caggacaccaatcggctgcaggcctcgatcctgctggcgctaaagccccagggccagggg
ctgaccgtcgtcggcgacgacgcacaatcgatctattccttccgtgccgcgacaatacgc
aatattctcgactttcccgccgccttcagcccggccgccaatatcgtcacgctcgaccgc
aactaccgctcgacgcagccgatcctcgccgccgccaacgccgtcatcgatctcgcctcg
gagcgcttcaccaagaacctctggaccgagcgccaatcgtccgagcggccgcgcctggtc
acggtgcgcgacgaggccgagcaggcgcgctacatcaccgacatggtgctcgacaatcgc
gaggaaggtgtgacactcaagcagcaggccgtgctcttccgcgcctcgcatcacagcggg
ccgctggaggtcgagctgacccggcgcaacatccccttcgtcaaattcggcgggttgaag
ttcctcgacagcgcacatgtgaaggacatgctggccgcccttcgcttcgcgcagaacccg
cgcgaccgggtggcgggcttccggctgatgcagatcctgcggggcgttgggccgtcgacg
gcgcaaaaggcactcgacctgatggccgaagacgccagcccgatctctgctcttgccgcc
atgccggcgccgccgcgctccggcgaggactggactgatttcgttgccatgctgcaggag
atgaagtccggcaaggcaggctggccggcggaaatcggcctggcgcggcaatggtatgcg
ccgcatctggaacggcttcatgaggacgcgaccacgcggcaggccgacctgctgcagctc
gagcagatcgctagcggttatgcctcgcgcgagcgtttcctcaccgaactcaccctcgat
ccgccggatgcgaccagcgaccaggcgggcgtgccgcttctcgacgaagactatctcatc
ctgtcgaccatccattccgccaagggccaggaatggacgaaggtcttcatgctgaacgtc
gtcgacggctgcataccgagcgatctcgccgtcggcaccaccgccgaaatcgaggaggaa
cgccggctgctctatgtggcgatgacgcgcgcccgggatggtcttgacctcgtcgtgccg
caacgctttttcacctatgggcagaattcgcagggcgaccggcacgtctatgcctcacgc
agccgcttcattccggccaccctgctgcagttcttcgaggcctgcaactggccgcaggga
aaatcggaggcagctcaagcccaggcgcggcaggtgcgcatcgatgtcggcgcccgcatg
cgcggcatgtggcgataa
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