Rhizobium laguerreae: RlegWSM1455_06280
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Entry
RlegWSM1455_06280 CDS
T08814
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rlw
Rhizobium laguerreae
Brite
KEGG Orthology (KO) [BR:
rlw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlw03016
]
RlegWSM1455_06280 (rnd)
Enzymes [BR:
rlw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RlegWSM1455_06280 (rnd)
Transfer RNA biogenesis [BR:
rlw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RlegWSM1455_06280 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
UFW65631
LinkDB
All DBs
Position
complement(1230673..1231818)
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AA seq
381 aa
AA seq
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MIETTADLAAACKELAKSDFITIDTEFLRETTFWPELCLIQMASPTTEVLVDPLAKGIDL
APFFELMADTKVLKVFHAARQDIEIIFNRGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVS
RIKNVHIDKSSRFTDWSRRPLSDKQLDYALADVTHLRDVYLSLKAELEREGRTSWLSEEM
DVLESRETYDMHPDDAWQRLKMRLRKPQELAILKYVAAWREREARARNVPRSRVLKDDAI
YEIAQQQPKDTEALGRLRTIPKGWERSTSGAAVIEAVNTALALPKADMPHVPRQAQAPEG
AAAAVELLKVLLKLISEKHGVAPKVIANSEDLDRIAAEGEKAEVAALHGWRRDLFGEPAL
QLIQGAIALRFVDRKVETVSL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccaccgccgatttggcggccgcctgcaaagagctggccaagtccgacttc
atcaccatcgacaccgaattcctgcgcgaaacgactttctggccggagctctgcctgatc
caaatggcaagcccgacgacggaagtcctcgtcgacccgctggccaagggcatcgatctc
gcccccttcttcgagctgatggccgatacgaaggtgctgaaggtctttcatgcagcccgc
caggacatcgaaatcatcttcaatcgcggcaatctcattccgcatccgatcttcgacacg
caggtcgccgcaatggtctgcggcttcggcgacagcgtctcctatgaccagttggtcagc
cgcatcaagaacgtccatatcgacaagtcgtcgcgcttcactgactggagccgccggccg
ctctcggacaaacagctggattatgcgctggccgacgtcacccacctgcgcgacgtctac
ctgtcgctgaaggcggaactcgaacgcgaaggccgcacctcttggctctccgaggaaatg
gacgttctcgagtcgcgcgaaacctacgacatgcatccagacgatgcctggcagcgcctg
aagatgcgtctgcgcaagccgcaggagctggcgatcctgaaatatgtcgccgcatggcgc
gaacgcgaggcgcgggcccgcaacgtgccgcgttcgcgggtgctgaaggatgatgcgatc
tacgagatcgcccagcaacagcccaaggataccgaggcgctcggccgtctgcgcaccatt
ccgaagggttgggagcgctcgacttccggcgccgcggttatcgaggccgtcaacaccgct
cttgctcttccgaaggccgatatgccgcatgtgccacgccaggcgcaggcgcccgaaggg
gccgctgctgccgttgaattgttgaaggttctgctgaagctgatttcggaaaaacacggc
gtggcgccgaaggtgatcgccaatagcgaagatctcgacaggatagccgccgagggcgag
aaggccgaagtcgctgccctgcacggctggcggcgcgatcttttcggcgagccggcactg
caattgatccaaggcgcgatcgctctgcgcttcgtcgaccggaaggtcgaaaccgtcagc
ctctga
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