Rhizobium laguerreae: RlegWSM1455_14955
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Entry
RlegWSM1455_14955 CDS
T08814
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rlw
Rhizobium laguerreae
Pathway
rlw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rlw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RlegWSM1455_14955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlw03400
]
RlegWSM1455_14955
Enzymes [BR:
rlw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RlegWSM1455_14955
DNA repair and recombination proteins [BR:
rlw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RlegWSM1455_14955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF2026
Motif
Other DBs
NCBI-ProteinID:
UFW62852
LinkDB
All DBs
Position
complement(2939623..2941077)
Genome browser
AA seq
484 aa
AA seq
DB search
MRRVVLAGRGELAEWRDAARAFAAAGISPEGIEWREKRAESGFAFQHDAMPPAPAAARRP
MTVPPAFIELAEMVLCHSDPTRFSLLYRLLWRLQMDRQLLEVASDEDVARARLMAKNVRR
DAHKMTAFVRFKEVGAVSADRRKFLAWFEPDHHIVRRTAPFFQRRFTDMDWLIATPKGSA
AWDGERLTMSDEPCEKPNLTDATDDLWRTYYASIFNPARLKLKAMQAEMPKKYWKNLPEA
DLIPGLIASAESKVRAMAAREATQSLPFHDRLQEAARSIPAEPEAPAGTLEALRAEAAGC
TRCPLHAKATQTVFGEGPRDAEVMFVGEQPGDQEDISGRPFVGPAGRLLDQVIAEAGIDR
STLYVTNAVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLDLEMALVKPKLVVAMGATALAA
LTDTKQRLQDVRGKAIAIDERRTLFVTVHPSYLLRIPDEQLKADELARFREDMLTVQRLM
LAVA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggtcgtgctggcaggacgcggggagcttgccgaatggcgtgatgccgcacgc
gccttcgcggccgccggcatatcgccggaggggatagagtggcgcgaaaaacgtgctgag
tccgggtttgcgtttcaacacgacgcgatgccgccggcacctgctgctgcacgaaggccg
atgacggtgccacccgcctttatcgagcttgcggaaatggttctctgccattccgatccc
acgcgcttttccctgctttaccgtctgctctggcggctgcagatggaccggcaattgctt
gaagtggcctccgacgaggacgtcgcccgtgccaggttgatggcgaaaaacgttcggcgc
gacgcgcacaagatgacggccttcgtccgcttcaaggaggttggtgcggtatcggcggat
cgtcgaaaattcctcgcctggttcgagccggatcaccatatcgtcaggcgtacagcgccc
ttcttccaacggcgcttcaccgacatggactggctgatcgccacacccaagggatcagcc
gcctgggacggcgagcggctgacgatgagcgacgaaccgtgtgaaaaacccaatcttacc
gatgctaccgatgacctctggcgcacctactacgccagcattttcaatccggcgcggttg
aagctgaaggcgatgcaggcggagatgccaaaaaaatactggaagaacctgccggaagcc
gatctcattcctgggctgatcgcatcggcggagagcaaggtgcgggccatggccgcccgg
gaggcgacccagtcattgccctttcacgatcgcctgcaggaggccgcgcgcagcatccca
gctgaacccgaagcgccggcgggcacgctggaagcactgcgcgcggaagctgccggctgc
acccgctgtccgcttcacgcgaaggcgacgcaaaccgtattcggggaggggccgcgcgat
gcagaggtgatgttcgtcggcgagcagccgggcgaccaagaggatatatcagggcgcccc
ttcgtcggtcccgccggcaggctgctggaccaggtgatcgctgaagcgggcatcgaccgc
tcgacgctttacgtcaccaatgccgtcaagcatttcaaatatgagccgcgcggcaagcgt
cgcatccatcagaagcccaatatgggagaggtgaagcattgccgctggtggctcgatctg
gagatggcgctggtcaagccgaagctggtcgttgccatgggggcgacggcgcttgcagcg
ctgaccgatacgaagcagcggctgcaggatgtcaggggtaaggcgatcgcgatcgacgaa
aggcgcacgctcttcgtgacagtgcatccgtcttatctgctgcgtattcccgatgagcag
ttgaaagcggatgagctggcacgatttcgcgaagatatgctgacagttcagcgccttatg
ctggcagttgcataa
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