Rhizobium laguerreae: RlegWSM1455_20325
Help
Entry
RlegWSM1455_20325 CDS
T08814
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rlw
Rhizobium laguerreae
Brite
KEGG Orthology (KO) [BR:
rlw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlw03016
]
RlegWSM1455_20325 (thpR)
Enzymes [BR:
rlw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RlegWSM1455_20325 (thpR)
Transfer RNA biogenesis [BR:
rlw03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RlegWSM1455_20325 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UFW63838
LinkDB
All DBs
Position
complement(4067989..4068582)
Genome browser
AA seq
197 aa
AA seq
DB search
MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDVDGRTADEIVERLDR
IDRPEFQFRLEGIGSFGSKKPHSVWAGVSQSPEMYALQGEIERICQRIGLPPDPRKFMPH
VTLARLKSSRLDDVVQYLAGRGNFHTATFTAPRFVLLSSRESVGGGPYLTEEVFPLHEVR
SAPSVSSSLQQPVKSLV
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactgtttaccgccctcgaaattccgcgcaatgcggcgatgagtctttcattg
ctgcgcggtggcctccccggagcacgatggatcgatgtggagaattaccacatcactctg
cgcttcatcggtgatgtcgacggccggacggccgatgaaatcgttgaacgcctcgaccgc
atcgaccggccggaattccagttccggctggaaggcatcggttccttcggctcgaagaaa
ccgcattcggtctgggccggcgtctcgcaatcgcctgagatgtatgccctgcagggcgag
atcgagcgcatctgccagcgcatcggcctgccgccggatccccgcaaattcatgccgcat
gtgacgctggcgcggctcaaatcttcgcggctcgacgatgtcgtgcaatatctggcggga
cgcggcaacttccacaccgcaaccttcaccgcaccgcgcttcgtgctgctttcgtcgcgc
gaatcggtcggcggcgggccttacctcaccgaggaagtattcccgctgcacgaggtgcgc
tcggcgcccagcgtttcgagcagcctgcagcagccggtcaagagcctggtgtag
DBGET
integrated database retrieval system
