Rhizobium laguerreae: RlegWSM1455_22245
Help
Entry
RlegWSM1455_22245 CDS
T08814
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rlw
Rhizobium laguerreae
Pathway
rlw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RlegWSM1455_22245 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlw03019
]
RlegWSM1455_22245 (pnp)
03016 Transfer RNA biogenesis [BR:
rlw03016
]
RlegWSM1455_22245 (pnp)
Enzymes [BR:
rlw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RlegWSM1455_22245 (pnp)
Messenger RNA biogenesis [BR:
rlw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RlegWSM1455_22245 (pnp)
Transfer RNA biogenesis [BR:
rlw03016
]
Prokaryotic type
tRNA degradation factors
RlegWSM1455_22245 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
UFW64186
LinkDB
All DBs
Position
complement(4481609..4483747)
Genome browser
AA seq
712 aa
AA seq
DB search
MFDTHTVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKAGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSEKETLVCRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENDPDILSMVATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESSLDLVVA
GTYDAVLMVESEAKELNEDVMLGAVMFGHRGFQPVLDAIIKLAEVAAKEPRDFQPADYSA
LETEMLGLAEVELREAYKITQKADRYAAVDAVKAKVKAHFLPEEGEARYTAEEVGAIFKH
LQAKIVRWNILDTKSRIDGRNLETVRPIVSEVGLLPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTPE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGDRFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKITGITEEIMKVALGQAQGGRVHILGEMSK
AITESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEIGQVYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTQDVVKEGDKVWVKLLGFDERGKVRLSMKVVDQATGQEIPNEKKKEEAAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacacacacagtcgaaatcgagtgggccggccgcccgctgaagctcgaaacc
ggcaagatcgcccgtcaggccgacggcgcggttctcgccacctacggcgaaaccgtcgtt
ctcgccaccgtcgtctcggccaaggcgccgaaggccggccaggacttctttccgctcacc
gtcaactaccaggaaaagacctatgcggccggcaagattcccggcggctatttcaagcgc
gaaggccgtccgagcgaaaaggaaaccctcgtttgccgcctgatcgaccgcccgatccgc
ccgcttttccctgagggctacaagaacgacacgcaggttgtcgtcaccgttatccagcat
gacctcgaaaacgacccggacatcttgtcgatggtcgctacctcggcagcgctgacgctg
tccggcgttcccttcatgggcccggtcggcggtgcacgcgtcggctacatcaacggcgaa
tacgttctcaacccgcatctcgacgagatggacgaatcgagcctcgacctcgtcgtcgcc
ggcacctacgacgccgtgctgatggtggaatccgaagccaaggaacttaacgaagacgtc
atgctcggcgccgtcatgttcggccacaggggcttccagccggtcctcgacgcgatcatc
aagctcgccgaagtggccgccaaggagccgcgcgacttccagccggcagactactccgct
ctcgaaaccgaaatgctcggccttgccgaagttgaacttcgcgaagcctacaagatcacc
cagaaggccgaccgctacgccgccgtcgacgccgtcaaggcgaaggtgaaggcgcacttc
ctccccgaggaaggcgaagcccggtacacggccgaagaagtcggcgcgatcttcaagcat
ctgcaggcgaagatcgtccgctggaatatcctcgacaccaagagccgcatcgacggccgc
aacctcgaaaccgtccgtccgatcgtttcggaagtcggtcttctgccgcgcacccacggt
tcggcgctcttcacccgcggcgaaacccaggcgatcgtggttgccaccctcggcaccggc
gaagacgagcagtatgtcgacagcctgacgggcatgtacaaggagcgcttcctgctccat
tacaacttccctccctactcggttggcgagaccggccgcatgggctccccgggccgccgt
gaaatcggccacggcaagctcgcatggcgtgcgatccgtccgatgctgccgacgcctgag
cagttcccctacacgctacgcgtcgtctccgagatcaccgagtcgaatggctcgtcctcg
atggcgaccgtctgcggtacctcgctcgctctgatggatgccggcgttccgctggcaaag
ccggtggccggtatcgccatgggtctgatcctggaaggcgatcgtttcgctgtcctgtcc
gacattctcggtgacgaagaccacctcggcgatatggacttcaaggtcgccggtaccgcc
gacggcatcacctcgctgcagatggacatcaagatcaccggtatcaccgaagagattatg
aaggtcgcccttggccaggcccaaggcggtcgcgtccatatcctcggtgaaatgtccaag
gccatcaccgaaagccgcggccagctcggcgaattcgctccgcgcatcgaagtcatgaac
atcccggtcgacaagatccgcgaagtcatcggctccggcggcaaggtcattcgcgaaatc
gtcgaaaagaccggcgcgaagatcaacatcgaggatgacggcaccgtcaagatcgcctcc
tcctccggcaaggagatcgaagcggcccgcaagtggatccactcgatcgttgccgaacct
gagatcggccaggtctacgaaggcacggtcgtcaagaccgccgacttcggcgccttcgtg
aacttcttcggcgcccgcgacggcctcgtccacatctcgcagcttgcttccgagcgtgtt
gccaagacccaggacgtcgtcaaggaaggcgacaaggtctgggtcaagctgctcggcttc
gacgaacgcggcaaggttcgcctgtcgatgaaggtcgtcgaccaggccaccggccaggaa
atcccgaacgagaaaaagaaggaagaagcggccgaataa
DBGET
integrated database retrieval system
