Rhizobium laguerreae: RlegWSM1455_23135
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Entry
RlegWSM1455_23135 CDS
T08814
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rlw
Rhizobium laguerreae
Pathway
rlw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rlw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RlegWSM1455_23135 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlw03400
]
RlegWSM1455_23135 (xseA)
Enzymes [BR:
rlw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RlegWSM1455_23135 (xseA)
DNA repair and recombination proteins [BR:
rlw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RlegWSM1455_23135 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
UFW64348
LinkDB
All DBs
Position
4662653..4664233
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AA seq
526 aa
AA seq
DB search
MSNVFDGDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKD
DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMAL
IEERKRKLGAEGLFDAARKKRLPFMPSVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPV
KVQGEGSGEEVANAIRGFNALQPSGAIPRPDVLIVARGGGSLEDLWSFNDEIVVRAAAES
AIPLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQ
MDQRRQSVRALMRALPSLDQLFALPRRRFDEAATGLGRGLELNTINKRRGFERVAGHLRP
DVLSNRIAERRQTLNERMARAERMVERLIDRSKARVDRAEAILASLPARLKTRTDRGRER
LGNLSRHADTAVRHQLTRARAELSAQDRVLQSLSYKNVLKRGYAVIRDEDNRPVSQAAHL
SAGMGIAIEFADGRVGAMTTEGGTPPAGAKKRSVRPADPPKQGSLF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgtcttcgacggcgattcgccgaccaaccttgccgaatattcggtttcggaa
ctttccggctcgatcaagcgcacggtcgaaaccgccttcgaccaggttcgcgtgcgcggc
gagatttccggctatcgcgggccgcattcctcgggccatgcctatttcgcgctgaaggat
gatcgcgcccgcatcgacgccgtcatctggaagggcaccttctcgcggctgaagttccgc
ccggaagagggcatggaagtcattgccaccggcaaggtcaccacctttccgggctcctcg
aaatatcagatcgtcatcgagacgctggagcccgccggcgccggcgcgctgatggcgctg
atcgaggagcgcaagcgcaagctcggcgccgagggcctgttcgatgccgcccgcaagaag
cggctgcccttcatgccgagcgtcatcggcgtcgtcacctcgccgaccggcgccgtcatc
cgcgatatccttcaccgcatctccgatcgttttcccgtgcatgtcctcgtctggccggtg
aaggtccagggcgagggctccggcgaggaggtggcgaacgccatccgcggcttcaacgcg
ctgcaaccttcaggcgccatcccccgcccggatgtgctgatcgtcgcacgtggcggcggc
agcctggaagacctctggagcttcaacgacgaaatcgtcgtgcgtgctgcggccgaaagc
gcaataccgctgatctcggccgtcggccatgagaccgactggacgctgatcgactatgcc
gccgatgtccgtgcgccgacgccgacgggggccgcggaaatggcggtgccggtcaaggcg
gaactcgaggcgcaggccgccgctcttgcggcgcgcctgcagggctgcatgaaccggcag
atggatcagcgccgccagtcggtgcgtgccctgatgcgggcattgccgtcgctcgatcag
cttttcgccttgccgcgccgccgtttcgacgaggcggcaaccggtctcggccgcgggctg
gaactcaacaccatcaacaagcgccgcggcttcgagcgtgtcgccgggcatctgcgtcct
gatgtgctgtccaatcgcatcgccgagcgccgccagacgctgaacgagcgcatggcccgg
gccgagcgcatggtcgagcggctgatcgaccgctcgaaagcgcgcgtcgatcgcgccgaa
gccatcctcgcctcactgccggcccggctgaagacccggaccgaccgcggtcgcgagcgc
ctcggcaatctttcgcgccatgccgatacggcggtccgccaccagctgacccgtgcgcgc
gccgagctttccgcgcaggaccgcgtgctgcagtcgctctcctataagaatgtgctgaag
cgcggttacgccgtgattcgcgatgaggataacaggccggtctcgcaggctgctcacctc
tccgccggcatgggcatcgccatcgaattcgccgacggccgtgtcggcgccatgaccacg
gaaggcggcacaccgccagccggtgccaagaaacgcagcgtaagacccgccgacccgccg
aagcagggaagcctgttctga
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