Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0002
Help
Entry
Rmag_0002 CDS
T00438
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma03030
DNA replication
rma03430
Mismatch repair
rma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rmag_0002
03430 Mismatch repair
Rmag_0002
03440 Homologous recombination
Rmag_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rma03032
]
Rmag_0002
03400 DNA repair and recombination proteins [BR:
rma03400
]
Rmag_0002
Enzymes [BR:
rma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rmag_0002
DNA replication proteins [BR:
rma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rmag_0002
DNA repair and recombination proteins [BR:
rma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rmag_0002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Ig_mannosidase
Motif
Other DBs
NCBI-ProteinID:
ABL01806
UniProt:
A1AV49
LinkDB
All DBs
Position
1543..2646
Genome browser
AA seq
367 aa
AA seq
DB search
MNIQLTVKELLTPLQIVISVVEKKQKLPILSHVLIQLKDNLLTLTTTDMEIEIRASQIIK
NQEEISFTIYAKDLIDIIKKLSEDIIIEFIIESSKIYIKVNKNSFELNTSNHQDFPSLPK
IKNSDIIKIKRHVLKDLIENTSFSMGSQDIRTYLNGLYLEIDKNSIVVVATDGHRLSIGK
VKQTHNLSNKKSVILPRKAVFELTKLLNKNGYKEIDIHLSDNYFYLISNNTTIISRLIDG
NFPNYLQVLPTNFNNIIIINRLAFLNSLQQASIFVEERTKGVKLVFKNSKLHIFSHSERG
QAKTQINIKNFDKEIEIAFNINYLISILEKLHTNEINMIVPDGKSQSCLLSSMNDDIYQY
VVMPMRI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacaactcaccgttaaagaactacttaccccattgcaaatagttattagtgta
gttgaaaaaaaacaaaaattacctattctttctcatgtccttatccaacttaaagataat
ttactaactttaactacaaccgacatggaaattgaaataagagcctctcaaattataaaa
aaccaagaagaaatttcttttactatttatgcaaaagacctaattgatattataaaaaaa
ttatcagaagatataatcattgaatttatcattgaaagttctaaaatttacatcaaagtt
aataaaaattcatttgaactcaacacatccaatcatcaagattttccgtcattaccaaaa
ataaaaaacagcgatattattaaaataaaacgacatgttttaaaagatttaattgaaaat
actagtttttcaatgggtagccaagatattagaacttacttaaatggtttatatctcgaa
attgacaaaaatagcattgttgttgttgcaactgatggtcatcgactttctattggaaaa
gtaaaacaaacccataacttatccaataaaaaatcagtcattttaccaagaaaagcagtg
ttcgaattaaccaaactacttaacaaaaatggatataaagaaattgacattcatttatca
gataattatttttatcttattagtaataacacgactattattagtcgattaattgatggc
aattttcctaactatttacaagtacttccaacaaattttaacaatattatcattattaac
cgcctagcttttctaaactcattacaacaagcctcaatttttgttgaagaacgaactaaa
ggagttaaattagtatttaaaaactctaaattacatattttttcacattctgaaagagga
caagcaaaaacgcaaattaatattaaaaattttgataaagaaattgaaattgcatttaat
attaattacttaatttcaattttagaaaaattacacaccaatgaaattaatatgatagtt
ccggatggaaaaagccaatcctgcttattaagtagtatgaatgatgatatttaccaatat
gttgtcatgcctatgcgtatttaa
DBGET
integrated database retrieval system
