Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0053
Help
Entry
Rmag_0053 CDS
T00438
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rma03021
]
Rmag_0053
03009 Ribosome biogenesis [BR:
rma03009
]
Rmag_0053
Transcription machinery [BR:
rma03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Rmag_0053
Ribosome biogenesis [BR:
rma03009
]
Prokaryotic type
rRNA transcription factors
Rmag_0053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
RNA_pol_A_CTD
KH_2
KH_1
HHH_2
KH_NusA_C
DNA_pol_lambd_f
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ABL01855
UniProt:
A1AV98
LinkDB
All DBs
Position
61014..62489
Genome browser
AA seq
491 aa
AA seq
DB search
MDGKELFLMVEAISNEKNISKEEVLESLEEALAIATKKRNNIDAYVEINRQTGEFLTFRQ
WMVVADGETFVDDDGTEFDSELHVYAKDASGVAVDDYVRKPIETQKFGRIAAQIVKQVIV
QKVREAEREVIVNDYSSRIGEVVMVTVKRVDRGNVYVDTGGGVDGMIPKFDLIPNESVRK
NDRLRAYIKEVKPSVRGAQIFLSRSMPEMMIELFKMEVPEISEGVIEIMGGSRDPGLRSK
LAVRAKDRRIDPIGSCIGMRGARVQAVSNELNAERVDIILWDEDHAQFVINAMAPAQVSS
IIVDEDKHSMDIAVEDDQLALAIGRGGQNIKLASRLTGWRLNVMSTTQADEKQAQETLKI
SDKLADQLGVDSEVAGVLIEEGFGSVGELVDADAQVLENIEEFDASMVEELQERASDAQL
VQALGDAEASELLMSVEGVGEDLASALIEADIVTVDDLAELSIDDLLDIQNMDTEIASSV
IMIARENEGWF
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaaagaattatttttgatggttgaggcaatttcaaacgagaaaaacatttct
aaagaagaggtgcttgagtcgttagaagaagcattggctattgctacaaaaaaacgtaat
aatattgatgcatatgttgaaattaacagacagacgggcgaatttttaacctttaggcag
tggatggttgtggcagatggtgagacatttgttgatgatgatggcactgagtttgattca
gaattacatgtttatgcaaaagatgcgagtggtgtagcggttgatgattatgtacgtaag
ccaattgaaacacaaaagtttggtcgtattgcagcgcaaattgttaagcaagtgattgtc
caaaaggttcgtgaggcagaaagagaggtgattgttaatgattattcctctcgtattggc
gaggtggttatggtcacggttaaacgtgttgatagaggcaatgtttatgtggatacgggt
ggtggcgttgatggcatgattcctaaatttgacctcattcctaatgaatcagtgcgtaaa
aatgaccgtttaagggcctatattaaagaggtgaaaccctctgttcgtggtgcgcaaatt
ttcctatcacgtagtatgcctgaaatgatgattgagctgtttaaaatggaagtgcctgaa
atttctgaaggcgtgattgaaatcatgggcggtagtagagacccgggtttgcgctcgaaa
ctagcagttagagctaaagatagacgtatagaccccattggttcttgcattggtatgcgt
ggcgcacgtgttcaggcggtgtcaaatgagctgaatgctgagcgtgttgatatcattctt
tgggacgaagatcatgcacaatttgtgattaatgcaatggcgcctgcgcaggtgagttca
attattgttgatgaagataagcactcaatggacatcgcagttgaggatgatcagttagca
ttagccattggtcgtggtggtcaaaacattaagcttgcctctcgtttaactggttggaga
ttaaatgtgatgtcaacaactcaagctgatgaaaaacaagcacaggaaacgttaaaaatt
agcgataaacttgccgaccaattaggcgttgattctgaagtggcaggcgtgttaattgaa
gaagggtttggtagtgtgggtgagttggttgatgcagatgcacaagtattagaaaacata
gaagagtttgacgcatcaatggttgaagaacttcaagagcgcgcatcagatgcacaatta
gtgcaggctttgggagatgctgaggcttctgagctactaatgagtgttgaaggagttggt
gaggacttggcaagtgcattaattgaagcagatattgttactgttgatgacttggcagag
ttgtctattgatgacttgctcgatattcaaaacatggatactgaaatagcatctagtgtt
atcatgattgcaagagaaaatgaaggatggttttaa
DBGET
integrated database retrieval system
