Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0134
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Entry
Rmag_0134 CDS
T00438
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma03030
DNA replication
rma03430
Mismatch repair
rma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rmag_0134
03430 Mismatch repair
Rmag_0134
03440 Homologous recombination
Rmag_0134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rma03032
]
Rmag_0134
03400 DNA repair and recombination proteins [BR:
rma03400
]
Rmag_0134
Enzymes [BR:
rma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rmag_0134
DNA replication proteins [BR:
rma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rmag_0134
DNA repair and recombination proteins [BR:
rma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rmag_0134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ABL01928
UniProt:
A1AVH1
LinkDB
All DBs
Position
complement(157219..158238)
Genome browser
AA seq
339 aa
AA seq
DB search
MKIKPQQLNIQLVNKLDTIYFIFGAEILLIEQSLAQINKTAKKVGFDERISFDIDANFDW
NQIFREISAVSLFSPKCIIKCRLKTGKIGIKGAKALTEIASTLPDDILLIVSTGKLDMAQ
QKSKWFKTLEQLGTVVQHFEMQSNHLVDWIANHMAELGLEANTEIAQSIAFCTEGNLTAS
MQEIQKLKMAYPNGKINTQEYLEQANQQSKYTVYGLIDAALFGNSNQVNKIYQTLISDTI
MPIQLSNSLYLEIKSIIEMSVELIQVKNINIVLQNNRVWNKRKPIITNILKRHSYQRLQK
LLLSLGRIDRSIKGMDNLNVIDELHTLLLSLAGKTQWTQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaccgcagcaacttaatattcaattagtcaacaaacttgatactatttat
tttatttttggtgcggaaatattactcattgaacaaagtttagcgcaaataaataaaaca
gcaaaaaaagttgggtttgacgaacggataagttttgatattgatgctaattttgattgg
aatcaaatctttagagaaatctcagccgtttctcttttttcaccgaaatgtattattaaa
tgtcgactaaagacagggaaaatcggcattaaaggtgctaaagcattgactgaaattgcc
agcactctgcctgatgatattttattgattgtttccactggaaaactggacatggcacag
caaaagagcaaatggttcaaaacactagaacagcttggtactgttgttcagcacttcgaa
atgcaaagcaatcatttggttgattggattgcaaatcatatggccgaattaggacttgag
gccaatacagaaattgcacaaagtattgctttttgcacagaaggcaatttgactgcttct
atgcaagaaattcaaaaactaaaaatggcttatccaaatggtaaaattaacacacaagaa
tatcttgaacaagctaatcagcaatctaaatacactgtttatggcttaattgatgcagct
ttatttggcaatagtaatcaagttaataaaatttatcaaaccttaatctctgatacgatt
atgccaattcaactaagtaattccttatacctagaaattaaatcaataatcgagatgtca
gttgaacttatacaagtgaaaaatattaatatagtcttgcaaaataatcgagtttggaat
aaaagaaaacctattattaccaatatattaaaacgccattcttatcagcgtttgcaaaaa
ttattattatcactaggacgtattgatcgctcaatcaagggtatggataatcttaatgtc
attgatgaattacacacattattactaagcttggctggaaagacacaatggactcaataa
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