Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0221
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Entry
Rmag_0221 CDS
T00438
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma03030
DNA replication
rma03430
Mismatch repair
rma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rmag_0221
03430 Mismatch repair
Rmag_0221
03440 Homologous recombination
Rmag_0221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rma03032
]
Rmag_0221
03400 DNA repair and recombination proteins [BR:
rma03400
]
Rmag_0221
Enzymes [BR:
rma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rmag_0221
DNA replication proteins [BR:
rma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rmag_0221
DNA repair and recombination proteins [BR:
rma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rmag_0221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Pollen_Ole_e_1
Motif
Other DBs
NCBI-ProteinID:
ABL02007
UniProt:
A1AVQ0
LinkDB
All DBs
Position
234459..235466
Genome browser
AA seq
335 aa
AA seq
DB search
MNFPWHANAWSKLQNMIDQDRMPHALLITGVEKIGKFELMQQIVGVLLKDDVIIRKDNIR
EDLDYSVLIRHSNYPNMVYCRSGEMVEKSKNRSKNIRIEQVRVFCDALNKTADQLQIGVI
FYGDQMNMSAANGLLKTLEEPRKNTLIIILAHHVENLPDTVVSRCQNIYIAPAYDQQTCQ
WLIEHIGKTQNADFDILQLLENTHGVPFKALSELSDGNFIHYQHYQNQLLNIAINPLMVT
QIKEFEGNELVVLNCLQNIVIEGIRLKTIHQEGGLIELNQVIKAVKFEFLFKLLDDIYHT
IKLSKTTVNIKLLLDIILIIWSHITHLKQYPQIIQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaattttccttggcatgcaaatgcatggtctaaactacaaaatatgattgatcaagat
cgtatgcctcatgcattattgattacgggtgttgaaaaaattggcaaatttgaactcatg
caacaaatagtaggtgttttgctaaaagatgacgttattattagaaaagataatatcaga
gaggatttggattattctgtattaattagacactcaaattatcctaatatggtttattgc
cgttcaggagaaatggttgaaaaaagcaaaaataggtctaagaacatccgtattgagcaa
gtacgtgttttttgtgatgccttgaataaaaccgccgatcaattacaaattggggttatt
ttttatggtgaccaaatgaacatgagtgctgccaatggtttactaaaaacccttgaagaa
cctagaaaaaatacgctgattattatcttagcgcaccacgttgaaaatttgccagatact
gttgtatcaaggtgtcaaaatatatacattgcaccagcgtatgatcagcaaacttgccag
tggttaattgaacatattggcaaaactcaaaatgcagattttgatattctgcaattatta
gaaaatacacatggcgttccatttaaggcgttgtctgagttgtctgatggcaattttatc
cattatcagcattaccaaaaccagttacttaatattgccatcaatccattaatggtgaca
caaattaaagagtttgagggtaatgagctagtggttttaaattgcttacaaaatattgtt
attgaagggattaggttaaagaccattcatcaagaaggtggattgattgagcttaatcaa
gtcatcaaagcagtaaaatttgagtttttattcaaactacttgacgatatttatcatacc
attaaactatcaaaaaccaccgttaatattaagttattattagatattattttaattata
tggtcgcatattactcatttaaaacaatatccacaaattattcaataa
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