Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0411
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Entry
Rmag_0411 CDS
T00438
Name
(GenBank) Three-deoxy-D-manno-octulosonic-acid transferase domain protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma00540
Lipopolysaccharide biosynthesis
rma01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Rmag_0411
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rma01005
]
Rmag_0411
Enzymes [BR:
rma01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Rmag_0411
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Rmag_0411
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
Rmag_0411
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
Rmag_0411
Lipopolysaccharide biosynthesis proteins [BR:
rma01005
]
Lipid A
Rmag_0411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Epimerase_2
AroM
TPR_6
Motif
Other DBs
NCBI-ProteinID:
ABL02173
UniProt:
A1AW66
LinkDB
All DBs
Position
complement(450077..451333)
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AA seq
418 aa
AA seq
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MNRSLYNIIGYLLLPFIILRLIIKSIKTPEFRQRINERLGLIAKIQTSIIWVHCVSMGEF
KAAIIIIDQLIKQYPNHQLLITTTTPTSSNAVINHYKNKVFHLYFPYDLPLIVKRYIKKI
NPKICLLLETEIWPNLTHELNKNNIPILLINARLSQQSKEKYQRFTSNLIKQTLNKFTLI
AAQNKNSANRFIELGTKNDDVIITGNIKFDQSTKPNIKINNILQAMVGRRKIVIFASTHE
GEEAQIINEYLKHKHTIDALLVIIPRHPERFDVVYKSFKSANLNVIRRSENQPTQNAQIL
LGDSMGEMMSYFNIADIVFMGGSLSNTGGHNMLEPATLAKPIIFGPNIFNFTEISSDLLK
QNAAIQIQNVAGLFKKIVMLLNDEKQCKVLGNNAQQYLYSKQGAVKNTLQLIKKFLTS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaagtctctacaacatcataggatatcttttattaccctttataattttaagg
ttaataattaaaagcataaaaacacctgaatttaggcaaagaattaacgagcgacttggc
ttaattgctaagatacaaacgtctattatttgggtgcattgtgtttctatgggtgaattt
aaagcagctattattattatcgaccaacttatcaaacaatatccaaatcatcaattattg
attaccacgactacacctacaagttctaatgcagtgattaatcattataaaaataaggta
tttcatctttattttccttatgatttgccactaattgtcaaacgttatattaaaaaaatt
aacccaaaaatatgcctattactagaaacagaaatttggcctaatttaacccatgaactc
aacaaaaataacattccaatactacttatcaacgccagattgtcgcaacaatcaaaagaa
aaataccaaagatttacctctaatttaatcaaacaaaccttaaacaaattcaccttaatc
gctgctcaaaataaaaattctgctaatcgttttattgaattgggtactaaaaatgatgat
gtaatcataactggtaatattaaatttgaccaaagcacaaaacccaacataaaaataaat
aatatattacaagcaatggttggcagacgtaaaattgttatttttgccagcactcatgaa
ggtgaagaagctcaaattattaatgaatatttaaagcataaacacaccattgatgcctta
cttgttattattccaagacatccagaacgtttcgatgtagtttataaatcattcaaaagt
gctaatcttaatgttattcgtcgctcagaaaaccaacctactcaaaatgctcaaattctt
ttaggagactctatgggtgaaatgatgtcttattttaatattgctgatattgtttttatg
ggaggtagtttaagcaacactggcggacataatatgcttgaacctgctactcttgccaag
cctattatatttggccctaatatatttaactttaccgaaatatcatcagacctactaaaa
caaaacgccgccattcaaattcaaaatgtggcaggtttatttaaaaaaatagtaatgcta
ttaaatgatgaaaaacaatgcaaagtattaggcaataatgctcaacaatacctttatagt
aagcaaggtgcagttaaaaatacgttacaattaatcaagaaatttcttacctcgtga
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