Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0466
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Entry
Rmag_0466 CDS
T00438
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma03030
DNA replication
rma03430
Mismatch repair
rma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rmag_0466
03430 Mismatch repair
Rmag_0466
03440 Homologous recombination
Rmag_0466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rma03032
]
Rmag_0466
03400 DNA repair and recombination proteins [BR:
rma03400
]
Rmag_0466
Enzymes [BR:
rma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rmag_0466
DNA replication proteins [BR:
rma03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rmag_0466
DNA repair and recombination proteins [BR:
rma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rmag_0466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_14
AAA_18
AAA_2
AAA_19
PIF1
AAA_30
nSTAND3
TsaE
AAA_7
Glyco_tranf_2_5
RCF1-5-like_lid
AAA_24
Mg_chelatase
Nab2
AAA_28
AAA_assoc_2
SKI
TFR_dimer
ResIII
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ABL02222
UniProt:
A1AWB5
LinkDB
All DBs
Position
complement(512915..514504)
Genome browser
AA seq
529 aa
AA seq
DB search
MSEHYQVLARKYRPHSFVKLVGQTHTKKTLINALDANNLHHGFLFTGTRGVGKTTIARIL
AKSINCEQGISSKPCDKCATCVEIDKGQSIDLIELDAASHTGVDNMRDILENAQYMPSKN
RYKIYLIDEVHMLSKNSFNALLKTLEEPPEHVKFLLVTTDPQKLPVTVLSRCLQFTLQQL
THDEILEQLKFIMNAEVLSYEESALGQIADFGNGSMRDALSLLDQSISYGKGTVTNADIK
AMLGLVHHDDIIKLTTHLFSQDAKAVIDFIKDLSRRGENLSNALKDLSSLFHKISISQIV
NTESNKTIQNLSTQISNFDLQIFYQMSINGSKDMALAPSEQIGFEMTLLRMLAFRSDTQP
NTEKKMIEIKSEVKISAPIEEKLQPKVEEKPGITKPTILDINNQQQWETLIQTLEFKNGA
QILVKNTLFDNTNNATLTLTLDNQFANLLSDQVQKSMLTTLRQKNSTLNLVINLGKPNAQ
TLAQKQTQAHNEKMAKIQTQFLNDKGVQKLEKIFDTKININSIKKINHV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcactatcaagttctagctaggaagtatcgtccgcattcttttgttaaattg
gtaggtcaaacacacaccaaaaaaaccctaatcaatgcacttgatgctaataatttgcat
cacggttttttattcacaggtacacgtggtgttggcaaaaccacgattgctagaattctt
gccaaatctattaattgtgaacaaggtattagctcaaagccttgtgacaaatgcgctact
tgtgttgaaattgacaaaggtcaatctattgatttaattgaacttgatgctgcctcacat
acaggggtggataacatgcgtgatattttagaaaatgcacaatatatgccaagcaaaaat
cgctataagatttatcttattgatgaagtgcatatgctttccaaaaacagctttaacgcg
cttttaaaaacccttgaagagccgccagaacacgttaaattcttattagtaaccacagat
ccacaaaaactacccgtaaccgttttatcacgttgcttgcaattcacattacaacaactg
actcatgatgaaattctagaacagttaaaatttatcatgaatgctgaagtactaagctat
gaagaatcagctcttggtcaaattgctgattttggtaatggttcaatgcgcgatgcactg
agtttacttgatcaatcaatttcttatggtaaaggtacggtaactaacgctgacattaaa
gccatgctgggcttggtgcatcatgatgatattattaaattaacaacacatttatttagc
caagatgccaaagctgtaattgattttattaaagacttatctcgccgtggtgaaaacctt
agcaatgcacttaaagatttaagctcgttatttcacaaaatatctatttcacaaattgtt
aatactgaaagcaacaagaccatccaaaatcttagcacacaaatatcaaactttgattta
caaattttttatcaaatgtcaatcaacggctctaaagatatggcactagcccctagtgaa
caaattggatttgagatgacactacttagaatgttagcatttcgtagtgacactcaacct
aacacagaaaaaaaaatgatagaaattaagtctgaagttaaaatatcagcgccaattgag
gaaaaattacaaccaaaagtagaagaaaaaccaggcattacaaaacccactatacttgac
attaacaatcagcaacaatgggaaacacttatccagacactggagtttaaaaacggtgcg
caaatattggtaaaaaatacactgtttgacaatactaataatgcaacgttaacactaact
ctagataatcaatttgctaatttactaagtgatcaagtacaaaaaagcatgttaacaaca
cttagacaaaaaaattcaacattaaatttagtgattaatcttggcaagcccaatgctcaa
acattggcacaaaaacaaactcaagcgcataatgaaaaaatggcaaaaatacaaacacaa
tttttgaatgataaaggcgtgcaaaaattagaaaaaatattcgatacaaaaattaacatc
aactcaatcaagaagattaatcatgtttaa
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