Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0482
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Entry
Rmag_0482 CDS
T00438
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma00900
Terpenoid backbone biosynthesis
rma01100
Metabolic pathways
rma01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Rmag_0482
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rma01006
]
Rmag_0482
Enzymes [BR:
rma01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Rmag_0482
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Rmag_0482
2.5.1.29 geranylgeranyl diphosphate synthase
Rmag_0482
Prenyltransferases [BR:
rma01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Rmag_0482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ABL02238
UniProt:
A1AWD1
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All DBs
Position
530600..531454
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AA seq
284 aa
AA seq
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MDFNIYITRVNAKLDQHLSAQGSLAKAIRYSTLANGKRFRPILAYCVANIFNTNLNLVDS
SSCAVEFIHTYSLIHDDLPAMDDDDIRHNQPVCHKRFGEAQAILAGDGLQALAFEVLVND
DLISADIKIELLKSLTHASFEMVEGQAIDLSIIAKQVNIATLETMHRKKTGALLSCAVNL
GAIVSKMCNNKDSVILNTFSKDIGLAYQIQDDVLDIETPDALLGKNQYSDECKDKPTYPS
LLGLDKSKLTYKNLYKKASDDLGLLSVDATELQQLTANLQTRLF
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggattttaatatttacatcacaagggttaatgctaaattagaccaacacttatcagca
caaggttctttggctaaagcaatacgctatagcacactagctaatggtaaacgctttaga
cctattcttgcttattgtgttgctaatatttttaacacaaatttaaatttggtcgattcc
agcagttgtgctgttgaatttattcatacttattctttaattcatgacgatttaccagcc
atggatgatgatgatatacgtcacaatcagccagtttgtcacaaacgctttggtgaagct
caagcaattttagcaggtgatgggttgcaagcattagcatttgaagtattggttaatgat
gatttaattagtgctgatatcaaaattgagttgttaaagtctttgactcacgcctcattt
gaaatggtagaaggtcaagcaattgatttatctattattgcaaaacaggtgaatattgca
acgctagaaaccatgcaccgaaaaaaaacaggggcactactaagctgtgcagttaatttg
ggggcaatcgtttctaaaatgtgcaataataaggacagcgttattctaaatactttctct
aaggatattggtttggcgtatcaaattcaagatgatgtgcttgatattgaaacgcctgat
gcgttattaggtaaaaatcaatattctgatgagtgtaaagacaaacccacctatccatct
ttattgggtttggataaatcaaaacttacctataagaatttatacaaaaaagccagtgac
gatttgggtttgttaagtgtagatgcgacagaattacaacaattaacggctaatttacaa
acaagattgttttaa
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