Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0550
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Entry
Rmag_0550 CDS
T00438
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma00300
Lysine biosynthesis
rma00470
D-Amino acid metabolism
rma01100
Metabolic pathways
rma01110
Biosynthesis of secondary metabolites
rma01120
Microbial metabolism in diverse environments
rma01230
Biosynthesis of amino acids
Module
rma_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rmag_0550
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rmag_0550
Enzymes [BR:
rma01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Rmag_0550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ABL02302
UniProt:
A1AWJ5
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All DBs
Position
complement(601989..602804)
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AA seq
271 aa
AA seq
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MLINFVKMHGLGNDFMMVDNLAGDITFNAEQIANLANRHLGIGFDQLLLVETSNTKNVDF
RYVIYNADGLEVEQCGNGARCFAFFVSKKGLSNNNPIVVETRSGIINLYLNDDNTVRVDM
GKPSFNPADILLLVPQQSTYYQIEGFDLGAVSIGNPHCVMLVEDVNTVDVSSIALRIQQS
ELLPNQANIGFMQILNTHEINLRVYERGSGETLACGSGACAAVVYGVEQGLLKENVVAHL
NGGDTLIEYIQGGHVFLSGPVQFVFEGKVEI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgctgattaattttgtaaaaatgcatggacttggtaacgactttatgatggttgacaac
cttgctggtgatattacttttaatgctgaacaaatagcaaatttagccaatcgacattta
ggcattggctttgatcaactattgttggttgaaactagcaacacaaaaaatgttgatttt
cgttatgttatctataatgctgacggtttagaggtggaacaatgtggcaatggtgcacgt
tgttttgcgttttttgttagtaaaaaaggtttaagtaacaacaatccaattgttgtagaa
actcgttctggtattattaatttgtacttgaatgatgacaatacagtgcgtgttgacatg
gggaaaccaagttttaatccagctgatatcctactcctagttccccaacaaagcacgtat
tatcaaattgaagggtttgatttaggtgctgtctcaattggcaaccctcattgtgtcatg
ttggttgaagatgttaatacagttgatgttagtagtattgcactcagaattcaacaaagt
gaattgctacccaatcaggctaatattggttttatgcaaattctgaatactcatgaaatt
aacttacgtgtttatgaacgtggttctggtgaaactttagcttgtggctctggcgcctgt
gcagcggtggtttatggtgttgaacaaggcttattaaaagaaaatgtggttgctcactta
aatggtggcgatactttgattgaatacatacaaggtggacatgtatttttatcaggtcct
gtacaatttgtatttgaaggtaaggtagaaatttaa
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