Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0594
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Entry
Rmag_0594 CDS
T00438
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rmag_0594
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rma01007
]
Rmag_0594
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rma03016
]
Rmag_0594
Enzymes [BR:
rma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Rmag_0594
Amino acid related enzymes [BR:
rma01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Rmag_0594
Transfer RNA biogenesis [BR:
rma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Rmag_0594
Prokaryotic type
Other AARSs
Rmag_0594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
GCR1_C
Motif
Other DBs
NCBI-ProteinID:
ABL02345
UniProt:
A1AWN8
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All DBs
Position
complement(648690..650183)
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AA seq
497 aa
AA seq
DB search
MSDQDNNKLIIERKSKLALLREAGNPFVNNFKPENLAQDIIQKFDSSSKEALAQKNVQVS
IAGRMMLKRVMGKASFVHVQDSSGQIQLFITRDELPENFYNEQFKKLDIGDIVGATGVLF
KTSVGELSIRISDIKLLTKSLRPLPEKFHGLSDQETRYRQRYVDLIMNKTSRNTFKRRSQ
IVSYIRNFFNNHDFIEVETPMLQTIPGGAIAKSFETHHNALDMPMYLRIAPELYLKRLIV
GGMDRVFEVSRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMNLTEKLFRGIAFDVYGSA
NIHYQGNDFDFSKPFECISVFDSILQYNPNLTATNLNQDNAKKIAEKLGIQVKENWGLGK
IQIEIFEATVEEKLIQPTFITEYPTEVSPLARCNDDNPFITDRFELFIGGREIANGFSEL
NDAENQAERFKKQVEEKDASDDEAMQYDADYIRALEYGMPPTAGEGIGIDRLVMLFTNSP
SIRDVLLFPHMRSEIGK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaccaagataataacaaattaattattgaaagaaaatcaaaattggctttatta
agagaggctggcaatccatttgttaataattttaagcctgaaaatttagcgcaagatatt
attcaaaaatttgatagttcttctaaagaagcgttagcgcaaaaaaacgtacaagtatct
atagcaggtcggatgatgctcaaacgtgtgatgggcaaagctagttttgtccatgtacag
gactctagtggacaaattcagctttttatcactcgtgatgagttgccagaaaatttttat
aatgagcagtttaaaaaattggatattggtgatattgttggtgctacaggtgttttattc
aaaaccagtgtaggtgaactatcaattcgtattagtgatattaaattattaaccaaatca
ctgcgcccgttgcctgaaaaatttcatggactgagcgatcaagaaactcgttatcgtcag
cgttatgttgatttgattatgaacaagacgtcacgcaatacgtttaaacgccgtagtcaa
attgttagctatattcgtaatttttttaataatcatgattttatcgaggtagaaacacct
atgttgcaaactattccaggtggcgcaatagccaaatcattcgagactcatcataatgca
ttagatatgcctatgtatttacgtattgcacctgagctttatttgaagcgtttaattgtt
ggcggtatggacagggtatttgaagttagtcgtaactttagaaacgaagggctttccacg
aggcacaatccagaattcaccatgattgaattttaccaagcctatgctacgtatcatgat
ttaatgaatttgacagaaaaattattccgcggtattgcgtttgatgtctatggtagcgcc
aatattcattaccaaggtaatgattttgatttttcaaagccatttgaatgtattagtgtg
tttgattcaattttacaatacaacccaaatctaacagcaaccaatttaaatcaggacaac
gctaaaaaaatagcagaaaaattaggtattcaagtcaaagaaaattggggcttgggcaaa
attcaaatcgaaattttcgaagctactgttgaagaaaagctcattcaacctacttttatc
actgaatatccaactgaagtatcaccactagcacggtgcaatgacgataacccatttatt
actgatcgatttgaattgtttattggtggtcgtgaaattgccaatggcttttctgaatta
aatgatgctgaaaatcaagctgaacgctttaaaaaacaagttgaagaaaaagatgcaagc
gatgatgaagccatgcaatatgacgctgattatattcgtgctctagaatatggcatgccg
cctacagcaggtgagggtattggcattgatagattagtaatgttattcactaattcacca
tcaattcgtgacgtacttctgtttccacatatgcgctccgaaattggtaagtaa
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