KEGG   Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0604
Entry
Rmag_0604         CDS       T00438                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rma  Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma02024  Quorum sensing
rma03060  Protein export
rma03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Rmag_0604
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Rmag_0604
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rmag_0604
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rma02044]
    Rmag_0604
Enzymes [BR:rma01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Rmag_0604
Secretion system [BR:rma02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Rmag_0604
  Eukaryotic Sec-SRP protein
   Rmag_0604
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin cobW AAA_22 AAA_31 DO-GTPase1 ABC_tran PTS_2-RNA KAP_NTPase AAA_14 ArsA_ATPase AAA_33 AAA_24 YqeC AAA_30 APS_kinase AAA_19 ResIII SLFN-g3_helicase AAA_16 nSTAND3 TsaE KTI12 AAA_25
Other DBs
NCBI-ProteinID: ABL02354
UniProt: A1AWP7
LinkDB
Position
complement(660101..661495)
AA seq 464 aa
MFDNLTERLQNSFKVLQGKNKLSESNIKEAIREVRRALLEADVALEVIKVFLDQVQTKVL
GLKVGQGLTPAQAFIKLVEIELTEIIGGEAESLDLKIQPPAVIMLAGLQGAGKTTSIAKL
ALYLKQRENKKVLVVSADVYRPAAIEQLEVLAKQVEVNFFPSTIDDKPSDIVASAKKYAQ
KQFFDVLLVDTAGRLHIDEQMMDEIKVLQKKVNPIETLFVVDSMTGQDAAHTAKAFADAL
PLTGVILTKIDGDARGGAALSVRHITGKPIKFLGVGEKIDTLEPFHPERVVSRLLGMGDV
LSLVEEISRKVDHKKVQKYTRQMAKGQFDLSDMRDQLLQMEQMGGMEALMDKLPGMGQVP
QNVKNQMIVGTETKKMIAIINSMTPKERNHIKLIKGSRKMRIANGSGTNIQVVNKLIKQF
EKMQKKMSSGKIQKMMAKMAGTDGMPDFSKIKLSNMGVGNKFLF
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtttgataatttaaccgagcgtctacaaaatagttttaaagttttacaaggaaaaaat
aaactatctgaatctaacattaaagaggcgattcgtgaagtacgccgtgcactgcttgaa
gctgatgttgcacttgaggtaattaaagtatttttagatcaagttcaaactaaagtatta
ggtcttaaggttggacaaggattaacaccagcacaagcatttattaaattggttgaaatt
gaattaactgagattattggcggagaggctgaatcgcttgatttaaaaattcaaccgcca
gctgttattatgctggcaggtttgcaaggtgcgggcaaaaccacctcaattgctaagctt
gcgctttatttgaaacagcgtgaaaacaaaaaagtattagtagttagtgctgatgtttat
cgtccagctgccattgagcaattagaagtattggccaagcaagttgaagtgaattttttc
ccatcaacgattgatgacaagccctcagatattgtagctagtgctaaaaagtatgcacaa
aaacagttttttgatgttttattggttgatactgcgggacgtttgcatatagatgagcaa
atgatggatgaaattaaagtcttacagaaaaaagtcaatccaattgaaaccttgtttgtg
gttgattctatgactggtcaggatgcggcacatactgccaaagcgtttgctgatgcgtta
ccattaacaggagttattcttaccaaaattgatggtgatgctaggggcggtgcagcattg
tctgtacgtcatattactggcaaaccgattaagtttttaggtgttggtgaaaaaattgat
acattggagccatttcatccagaacgtgtagtttcaaggcttttgggtatgggtgatgta
ctctctctggtagaagaaatttcacgcaaggttgaccataaaaaagtgcaaaagtacact
cggcaaatggccaaaggtcaatttgatttatctgatatgcgtgatcaacttttgcaaatg
gagcaaatgggtggcatggaagcgttgatggacaaacttccaggcatgggtcaagttcca
caaaatgttaaaaatcaaatgatagttgggactgaaactaagaaaatgatcgctattatt
aattctatgacacctaaagaacgtaaccacattaaactgattaaaggttcgcgcaagatg
cgcattgctaatggctctggtacgaacattcaagtagttaataaacttatcaaacaattt
gaaaaaatgcaaaaaaaaatgagtagcgggaagattcaaaaaatgatggctaaaatggca
ggtactgatggtatgcctgatttttctaaaattaaattgtctaatatgggtgttggtaac
aaatttcttttttaa

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