Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0632
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Entry
Rmag_0632 CDS
T00438
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma00260
Glycine, serine and threonine metabolism
rma00630
Glyoxylate and dicarboxylate metabolism
rma00670
One carbon pool by folate
rma00680
Methane metabolism
rma01100
Metabolic pathways
rma01110
Biosynthesis of secondary metabolites
rma01120
Microbial metabolism in diverse environments
rma01200
Carbon metabolism
rma01230
Biosynthesis of amino acids
rma01240
Biosynthesis of cofactors
rma04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rmag_0632
09102 Energy metabolism
00680 Methane metabolism
Rmag_0632
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rmag_0632
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Rmag_0632
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Rmag_0632
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Rmag_0632
Enzymes [BR:
rma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Rmag_0632
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ABL02379
UniProt:
A1AWS2
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All DBs
Position
complement(685912..687165)
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AA seq
417 aa
AA seq
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MFNKSQTLAKVDIEIHQAITQEKVRQEAHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
RKRYYGGCEYVDTVEQLAIDRAKVLFGADYANVQPHSGSQANAAVFQALLVPGDTILGMS
LVHGGHLTHGAAPSFSGKNFNAIQYGLNEKTGEINYEQVEALVKKHKPKMIIAGFSAYSR
VVDWQYFREIADTAGAYLMVDMAHVAGLVVTGEYPSPVAIADVTTTTTHKTLRGPRGGLI
LAKANEAIEKKLNSAIFPGIQGGPLMHVIAAKAVSFKEAMSDEYKVYQKQVKINAQVMAN
IFIERGFDVVSGGTDDHLFLVSFIDQRLTGKAVDAALDSAYITVNMNVVPNDPQSPFVTS
GIRVGTPAVTTRGFNEADCADLAMWMCDICADLENEAMIDQVREKVTSLCVKHPVYN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataaatctcaaacgttagctaaagtagatattgaaatccatcaggcgattaca
caagaaaaggttcgccaagaggcacatattgagttaattgctagtgaaaactacacctca
cctgcagtgatggaggcgcaaggctcgcaattgacgaataagtatgctgagggttatcct
cgtaagcgctattatggtgggtgtgaatatgttgatacagttgaacaattggcgattgat
cgtgctaaggtattatttggtgcagattatgcgaatgttcaaccgcattctggttctcaa
gcgaatgctgcggtttttcaggcattgttagtacctggagatacaattttaggtatgagt
ttggtgcatggcgggcatttaacgcatggtgctgcaccttcgttttcgggtaaaaatttt
aatgccattcagtacggtttgaacgagaaaacaggtgagattaattatgagcaagttgaa
gctttggtaaagaagcataagcccaaaatgattattgctggtttttcagcgtattcacgt
gtagttgattggcaatattttagagaaattgcagatactgctggcgcttatttaatggtt
gatatggcacatgttgcgggtttggtggtaacgggtgagtatccatctccagtggcaatt
gcagatgtgactacaacaactacgcataaaacacttcgtggccctcgcggtggtttaatt
ttggctaaggccaatgaggcaattgagaagaaacttaattctgctattttccctggtatt
caaggtgggccactgatgcatgttattgctgctaaagcggtgagttttaaagaggcaatg
agtgatgaatataaagtttatcaaaagcaagtaaagattaatgcacaagtgatggctaat
atatttattgaacgcggttttgatgtggtgtctggtggtacggatgaccatttgttttta
gtaagttttattgaccaaaggctaacaggtaaagcagtagatgctgccttagatagtgcg
tatattacagttaatatgaatgttgtacctaatgatccacagtctccttttgtaactagt
ggtattcgtgtgggtacgccagcggtgacaacgcgtggttttaatgaagctgattgtgcc
gatttagccatgtggatgtgtgatatttgtgcagatttagagaatgaggctatgattgac
caggttagagaaaaagtcactagtctttgtgttaagcacccagtttataattaa
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