Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0759
Help
Entry
Rmag_0759 CDS
T00438
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma00470
D-Amino acid metabolism
rma00550
Peptidoglycan biosynthesis
rma01100
Metabolic pathways
rma01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rmag_0759
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rmag_0759
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rmag_0759
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rma01011
]
Rmag_0759
Enzymes [BR:
rma01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Rmag_0759
Peptidoglycan biosynthesis and degradation proteins [BR:
rma01011
]
Precursor biosynthesis
Amino acid ligase
Rmag_0759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
TTL
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ABL02486
UniProt:
A1AX29
LinkDB
All DBs
Position
805322..806203
Genome browser
AA seq
293 aa
AA seq
DB search
MIAVLMGGNSAERAVSLKSGEAVYQALINQNINCFEFDWHGYNLSELWQQEFDQAFIVLH
GRGGEDGYIQKQLENRCIRYTGSDSNASHNGIDKARTKIIWKQHNLTLAPSIVASIHKPI
EPIDFPLPWMVKPTLEGSSIGISKVDSQIQLNNALMLAWQYNSHALIEQWIEGDEYTVAI
LGDKALPVVKIITDQGFYDYESKYHSNKIQYLCPCGLSSSQEQVLQVIALKAFFAINAKG
WGRVDFIINQHNKPYLLEINTVPGMTSHSLVPMAAKAMGMSFNKLVVAIINEI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagtgctaatgggtggaaattcagcagaaagagcagtttctcttaaaagcggt
gaagccgtttaccaagcactgatcaaccaaaatattaattgctttgaatttgattggcat
gggtacaacttatcagaactttggcaacaagagtttgatcaagcgtttattgttttgcat
ggtcgtggtggtgaagacgggtatatccaaaaacaactagaaaatcgatgtattcgttat
acagggtctgactcaaatgctagtcataatggcatagataaagcacgtactaaaatcatt
tggaaacagcataatcttacgcttgcaccctctattgttgcaagtattcataaacccatt
gagcccattgacttcccactgccttggatggttaagcccactttagagggctctagtatt
ggtattagtaaagttgatagtcaaatacaattaaataacgcattaatgcttgcttggcaa
tacaactcacatgctttaattgaacaatggattgaaggtgacgaatacacagtggcaatt
ttgggcgataaagccttacctgttgttaaaattataactgaccaaggtttttacgattat
gaatcaaaataccactcgaataaaattcaatacttatgcccttgtggtttaagttcatcc
caagagcaagtattacaagtcattgcacttaaagcattttttgctattaatgctaaagga
tgggggagagtagattttattattaatcaacacaataagccttatttattagagattaac
accgttccaggtatgacatcacactcattagttcctatggcagcaaaagcaatgggcatg
agttttaataaactggtcgtggcaattattaatgaaatataa
DBGET
integrated database retrieval system
