Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0762
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Entry
Rmag_0762 CDS
T00438
Name
(GenBank) Lytic transglycosylase, catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rma01011
]
Rmag_0762
Enzymes [BR:
rma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Rmag_0762
Peptidoglycan biosynthesis and degradation proteins [BR:
rma01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Rmag_0762
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
DUF7939
Motif
Other DBs
NCBI-ProteinID:
ABL02489
UniProt:
A1AX32
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All DBs
Position
complement(807630..809204)
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AA seq
524 aa
AA seq
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MCRRFKILKFFKRFFYLSFLLFTACEGATVSTIIVKVTPKPVQINTNDLVVEKDLWSYIA
NRYTLHAPSQKELFWHIDWFKKNPDYLTRVTKRAKPYLYLVKTEVERAGLPIEIVLLPIV
ESAYYPFSYSHGAASGLWQFIPSTGKLYGLQNNWWYDARRDVLASTKAAVKYLKNLNKLF
NGNWLLAIAAYNSGPGRVQKAIAKNKQQGRPTDFWHLDLPKETRGYVPRLLAMAQLIKHP
KRYGQIITTVSNTPQVQAIKLDSQFDLALISEWAQLDLEQLYTLNPGLKRWATPSDGGYN
LLLPIDTIATFKKNLAKHSKEAIVKWVRHQINQGDSLSKIAHQFNTTISQIKSVNNLHGN
VVKVGKYLIVPIPQKNDQYCSLSEAQKEVQRMNAKKMGVRIVHTVISGDSLWSIAKQYNT
HVGSIVKWNHITKNKPLQVGKKLILWQYNSTKPKDLSKLMNVGINIDRKIIYYVKSGDNL
STIAHKFSVQISQLKKWNQLTDKKPLQPKQKLIIIVNVVNSNMK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtaggcggttcaaaattttaaagttttttaaacggtttttttatctttcattctta
ttgtttactgcttgtgaaggtgcgacagtttcaacgattattgtaaaagtaacgccaaaa
ccagttcaaattaataccaacgacttggttgtcgaaaaagacctttggagctatattgct
aatcgctatacgttacatgcacctagtcaaaaggaattgttctggcatattgattggttt
aaaaaaaatcctgattatttaactcgtgttaccaagcgtgcaaaaccttatttgtattta
gtgaaaacagaagtagaacgtgctggattacccattgaaatcgtcttgttgcccattgtt
gagtcggcttattatccattttcttattcacacggtgcagcctcaggtttgtggcagttt
attccttcgactggaaagttgtatggtttgcaaaacaactggtggtatgatgcgcgtcgt
gatgtgttggcttcaactaaggcggccgttaaatatttgaaaaatcttaacaaactattt
aatggaaattggctattagcaattgctgcttataattcaggtcctggacgcgtacaaaaa
gccattgctaaaaacaaacaacaaggcaggccgactgatttttggcacttagacttgcca
aaagaaaccagaggttatgtgccaagattattggcaatggcgcaactcattaagcatcct
aagagatatgggcaaataattacaacagttagtaacacacctcaagtgcaagctattaag
cttgattcgcaatttgatttggcattaatttctgagtgggcacagctagatttagagcaa
ttgtatactttaaatccaggacttaaacgctgggcaacgccaagtgatgggggttataat
ttattattgccaattgatacaattgcaacttttaaaaagaatttagccaaacattctaaa
gaagctatagtgaaatgggtacgtcatcagattaatcaaggtgatagtttaagcaagatt
gcccatcaattcaacactacaataagtcagattaagagtgtgaataatttgcacggtaat
gtggttaaagtaggcaaatacttgattgtgccaattccacaaaaaaatgaccagtattgt
tcattgtcagaagcgcaaaaagaagtgcaaagaatgaatgcaaaaaaaatgggcgttaga
attgttcatactgttattagtggtgatagtttatggagtattgccaaacagtacaatact
catgtgggtagtatcgtaaagtggaatcatattactaaaaacaaaccacttcaagtgggt
aaaaagttgatattatggcagtataattcaaccaaacctaaagacttatcaaagctaatg
aatgtgggtataaatattgatagaaagattatttattacgttaaaagtggtgataattta
tccaccattgcacataaatttagtgtgcagattagtcagcttaaaaaatggaatcagttg
acggataaaaaaccactacagcctaaacaaaaattaatcatcattgttaacgttgttaac
tctaatatgaaataa
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