Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0922
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Entry
Rmag_0922 CDS
T00438
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rma03016
]
Rmag_0922
Enzymes [BR:
rma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Rmag_0922
Transfer RNA biogenesis [BR:
rma03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Rmag_0922
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
ABL02635
UniProt:
A1AXH8
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All DBs
Position
complement(985460..987265)
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AA seq
601 aa
AA seq
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MINALVAYKGKSARIVSQTMHKFALEFDDGSLRSVREKDFRFIHPEFVQISGACVQADIT
VLENFQKEVLTLEEITQWLFDEYSAKNAWCSYILIEDGLYLYWQKDKVFVRPTSQVESIQ
TKRDVQIFEAKNLKHCVDNISNNTFDEQDLPYIEEIVKVALNQSKYAKILANSDIENTPE
SAYKLLLRLDYFKPSFNPYPARYNISKDEQIDVSMAQIERVDLTYLSSYAIDNADSNDAD
DAISIDGDKIFVHIADVSLIATVGSELDAYAQERASNLYLPEQIIHMLPISATKMCALGL
AETSNALSIGFTLESGEIDHIEVVHSLIKVTNINYDDADEMLVSNEHLSKLQSITKAHKK
YRDNCGAISLNLPNVDVKFKQGQVSILTQSSSQSRELVAEMMIMAGRVVAQFSIDNDIVM
PYVIQDKGKFPQETLDNKDVLSLSESFKATKFFRHSAISTKNLPHFGLGLKVYLRITSPL
RRYLDLLAHQQLSCFIKGEDTLGKEDVKKIIGIHNTIMSTVGRTVRSSNDHYKCVYLLYN
PSWQGEGIVIDTRGDKVLFMIPELGMMTQIKFKILPKLDEKVALKVTTVDLVDCRANFKA
I
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
ttgattaacgctttagttgcctataaaggcaaatctgcgcgtattgttagtcaaacgatg
cataaatttgcattagagtttgatgatggttctttgcgatcggtacgggaaaaagatttc
cgttttattcatcctgaatttgttcaaataagtggtgcttgtgtacaagcagatattact
gttcttgaaaattttcaaaaagaagtattaacattagaagaaataacacaatggttgttt
gacgaatatagtgccaaaaatgcttggtgtagttatattttaattgaagatggtttatat
ctttattggcaaaaagataaagtttttgtacgcccaacctctcaagttgaaagcatccaa
actaagcgtgacgttcaaatttttgaggctaaaaaccttaaacactgtgtggataatatt
agtaacaatacctttgatgagcaagatttaccttacattgaagaaattgtaaaagttgcg
ttaaatcaatctaagtatgctaagattttggccaattctgatatagaaaatacgcctgaa
tctgcgtataaattgttattaagacttgactatttcaagccaagctttaatccatatccg
gcacgttataatatttctaaggatgagcaaattgatgttagcatggcacaaattgagcgg
gttgatttaacgtatttatccagttatgcaatagataatgctgattcaaatgatgctgat
gatgcaattagtattgatggagataagatttttgttcatattgctgacgtgtccttgatt
gctactgttggttctgagttggacgcttatgcacaagagcgtgcttctaatttatatttg
cctgaacaaattattcatatgttgcctatttctgcgacaaaaatgtgtgcattagggttg
gctgaaacgtcaaacgctttgtcgatagggtttactttagaatcaggtgaaattgatcat
attgaagtggtccatagtttaattaaagtgactaatataaattacgatgatgcagatgag
atgttagtgtctaatgaacatttatccaaattacaaagtattacaaaggcgcataaaaaa
tatagagacaattgtggtgcaatcagtttaaatttacccaatgttgatgttaaatttaag
caaggccaagtatcaattttgacacaaagttcaagtcaaagtcgtgaattagtggctgaa
atgatgataatggcaggtcgtgttgttgcacaattttctattgataatgacattgttatg
ccttatgtaattcaagataaaggcaagtttccacaagaaacattggataataaagacgta
ttatctttatctgaatcgtttaaagctacaaaattttttagacactcagccatatccaca
aagaatttgccacattttggactaggccttaaagtgtatttacgtattactagtccactt
agaaggtatcttgatttgcttgcacatcagcagcttagctgtttcattaaaggtgaagat
acactaggcaaggaagatgttaaaaagattattggcattcataataccatcatgtccact
gttggtagaacagtacgttctagtaatgaccattacaaatgcgtttatttactttataac
ccatcatggcagggcgaaggtattgtgatagatacacgtggtgataaagtattatttatg
attcctgaactgggtatgatgacacaaattaagtttaaaattttgcctaagctagatgaa
aaggtagcgttaaaggtaacaaccgttgatttagttgattgtcgtgctaatttcaaggcg
atttaa
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