Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_0984
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Entry
Rmag_0984 CDS
T00438
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rma03016
]
Rmag_0984
Enzymes [BR:
rma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Rmag_0984
Transfer RNA biogenesis [BR:
rma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rmag_0984
Prokaryotic type
Rmag_0984
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF3969
Motif
Other DBs
NCBI-ProteinID:
ABL02690
UniProt:
A1AXN3
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All DBs
Position
1046122..1046865
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AA seq
247 aa
AA seq
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MKIALGVAYLGTNFHGWQCQKPNIRTVQQVVEQALSSVANHPVRVFCSGRTDAGVHATCQ
VIHFETNIKRENKVWLFGGNANLPSDVNFTWVKHVNDNFHARFSAIARQYNYKIHNTKVR
CSIITAHSLWESKKLDIMAMNKASKYLIGKHNFSAFRGSLCQAKSSIKTIEFIKLNKCDD
NILLDIKADAFLHHMVRNIVGTLLKVGKGEKSIEWVKEILDNKQRKQAAPAAPSHGLYFI
KAFYSNL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcattaggtgttgcatacttaggcacaaacttccacggatggcagtgtcaa
aaacctaacatccgcactgttcagcaagtagttgaacaggctctatcaagcgttgccaat
caccccgttagggtattttgttctggtagaaccgatgctggcgtgcatgccacctgccag
gttattcactttgaaaccaacattaagcgcgaaaataaagtttggctatttggtggcaat
gctaatctaccaagtgatgttaatttcacttgggtaaaacatgttaatgataatttccac
gcacgatttagtgccattgctagacaatacaactacaaaatacacaacacaaaagttcgc
tgttccatcataacagctcattcattatgggaatcaaaaaaattggacataatggcaatg
aataaagccagtaaatatttaattggcaaacataacttttcagccttcagaggtagttta
tgtcaagcgaaatcctccattaaaaccattgaatttataaaactaaacaaatgtgatgac
aacattctactagacataaaagccgatgcctttttacatcatatggtacgcaacattgtt
ggcacattactcaaagtgggtaaaggtgaaaaatccattgaatgggtgaaagagatactg
gataataagcagcgcaagcaagccgcccctgccgccccgtcccatggtctttactttatt
aaagctttttactccaatttataa
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