Candidatus Ruthia magnifica (Calyptogena magnifica): Rmag_1008
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Entry
Rmag_1008 CDS
T00438
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rma
Candidatus Ruthia magnifica (Calyptogena magnifica)
Pathway
rma00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rma00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rmag_1008
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rma01007
]
Rmag_1008
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rma03016
]
Rmag_1008
Enzymes [BR:
rma01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Rmag_1008
Amino acid related enzymes [BR:
rma01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Rmag_1008
Transfer RNA biogenesis [BR:
rma03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rmag_1008
Prokaryotic type
Rmag_1008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Csm2_III-A
Motif
Other DBs
NCBI-ProteinID:
ABL02714
UniProt:
A1AXQ7
LinkDB
All DBs
Position
complement(1074537..1075826)
Genome browser
AA seq
429 aa
AA seq
DB search
MLSKKQLRLNIKAVADALKKRHFYFDVNQLIELENNRKKNQIETQNLQNVRNIQSKAIGK
AKVSGEDVKPLLKNIADLSDKLNLVKSNLQVIQSDIDAIVLLMPNIPHYSVPWGKSEEDN
VEVSKWGEPGQYDFDVKDHVDLGEMYGLDFETSVKISGTRFSVMTGKIARLHRALTQFML
DRHSEVNGYTEAYVPYLVNAESLIGTGQLPKFEADLFKTYLHGEQGEAKTLYLIPSAEVP
VTNMMRNMIVKESDLPLKFVAHTPSFRSEAGSYGRDTRGLIRQHQFEKVELVQVVKAQDS
YQALEELTAHAEGILQALELPYRKVNLCTGDLGFSAAKTYDLEVWLPGQNAYREISSCSC
FENFQARRLQLRYKNEETNKPELLHTLNGSGLAVGRTLVAVLENHQQADRSIKIPFVLQS
YMGSLKVIN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtaaaaagcaattaagattaaacataaaggctgttgctgatgccctaaaaaag
agacacttttattttgatgttaaccaattaattgaattagaaaataatagaaaaaaaaat
caaatcgaaactcaaaacctgcaaaatgtacgtaatatacagtctaaggcgattggcaaa
gccaaagtttctggagaagatgtcaaacctttattgaagaatattgcagatttaagtgat
aagctaaatttagtaaaatcaaatttgcaagtaattcagtctgatattgatgcgattgtt
ttattgatgccaaatattcctcattattctgtaccttggggtaagagtgaagaggataac
gttgaagtgtcaaaatggggggaaccaggtcagtatgattttgatgtaaaagatcatgtt
gatttgggtgaaatgtatgggttagattttgagacatcagttaagatctctggtactaga
ttttctgtcatgactgggaaaattgcacgtctacatcgtgcattgacacaatttatgttg
gatcgacatagcgaagtaaatggttataccgaggcttatgtgccttatttagtaaatgca
gaatctttaattggtacgggccagttaccaaagtttgaagctgatttatttaaaacgtac
ctgcatggagagcagggagaagccaagacattgtatttgattccaagcgctgaagtgcct
gtaactaatatgatgcgtaatatgattgtcaaagagagcgatttaccgcttaagtttgtg
gcgcatacacctagttttagatcagaggcaggtagttatggacgtgatactcgtggcctt
attcgtcaacatcaatttgaaaaagttgagttggtgcaagtggttaaagcgcaagactcg
tatcaagctttagaggaattaactgcgcacgctgaaggcatcttgcaagcattagaatta
ccttatagaaaggtcaatttatgtacaggggatcttggtttttctgccgctaaaacctat
gatttagaagtgtggttacctgggcaaaatgcttatcgtgaaatttcttcttgttcttgt
tttgagaattttcaggcacgacgtttacaattgagatataagaatgaagaaactaataag
ccagaattattacatacattgaacggttcaggtttggcggttggtagaacgttagtggcc
gtattagaaaaccatcaacaagccgatagaagtattaaaataccctttgttttacaaagc
tacatgggtagtctaaaagttattaattaa
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