Roseicyclus marinus: MACH21_02620
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Entry
MACH21_02620 CDS
T09703
Symbol
xthA1
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rmai
Roseicyclus marinus
Pathway
rmai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MACH21_02620 (xthA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmai03400
]
MACH21_02620 (xthA1)
Enzymes [BR:
rmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MACH21_02620 (xthA1)
DNA repair and recombination proteins [BR:
rmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MACH21_02620 (xthA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BDW84085
UniProt:
A0AA48HA91
LinkDB
All DBs
Position
272019..272807
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AA seq
262 aa
AA seq
DB search
MPFTLATWNINSVRLRADLVLKLLAEEAPDVLCLQECKSPVDKMPLDVFAAAGYGHVVAR
GQKGYNGVAILSRLPLEDVGHRDMCAKGDARHVAAQLENGVTIHNFYVPAGGDEPDRTVN
EKFGHKLDFLTEMRDWFGTDRPEKSILVGDLNIAPREDDVWSHKALLKVVSHTPIEVEHM
AQVQDAGAWVDITRQDIPDGLLYSWWSYRSPDWDAADKGRRLDHVWATSDISNAAHSSRV
LRDARGWTQPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcacccttgccacttggaacatcaactcggtccggctgcgtgccgacctggtg
ctgaaacttttggccgaggaagcgccggatgtcctgtgcctgcaggaatgcaagtcgccg
gtcgacaagatgccgctcgatgtctttgccgccgcaggctacggccatgtcgtggcccgt
gggcaaaagggatacaacggtgtcgccatcctgtcgcggctgccactggaggatgtgggc
caccgcgacatgtgcgcaaagggcgacgcccgccatgtcgcggcgcagctggaaaacggg
gtgacgatccacaatttctacgtgccggcgggcggcgatgaacccgatcgcaccgtgaac
gagaaattcggccacaagctcgatttcctgaccgagatgcgggattggttcggcaccgac
cggcccgaaaaatccatcctcgtcggcgatctgaacatcgccccgcgcgaagatgacgtc
tggtcgcacaaggcgcttctgaaggtcgtgagccatacgcccatcgaggtcgagcatatg
gcgcaggtgcaggatgcgggggcatgggtcgatatcacacggcaggatatccccgatggc
ctgctctacagctggtggtcctatcgcagccccgattgggatgccgccgacaaggggcgc
aggcttgatcatgtatgggccacctccgacatttccaacgcggcccattccagccgcgtg
ttgcgggacgcccgtggctggacccagcccagcgaccatgccccggttttcgcgacattc
gacctttga
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