Roseicyclus marinus: MACH21_03470
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Entry
MACH21_03470 CDS
T09703
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rmai
Roseicyclus marinus
Pathway
rmai03030
DNA replication
rmai03430
Mismatch repair
rmai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MACH21_03470
03430 Mismatch repair
MACH21_03470
03440 Homologous recombination
MACH21_03470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmai03032
]
MACH21_03470
03400 DNA repair and recombination proteins [BR:
rmai03400
]
MACH21_03470
Enzymes [BR:
rmai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MACH21_03470
DNA replication proteins [BR:
rmai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MACH21_03470
DNA repair and recombination proteins [BR:
rmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MACH21_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS_9
PAS_7
DEDDh_C
PAS_4
PAS
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BDW84170
UniProt:
A0AA48H3I2
LinkDB
All DBs
Position
complement(360751..362754)
Genome browser
AA seq
667 aa
AA seq
DB search
MFTRLSLRLRIFLFFALIALGGSALVVTGLVIGYIRLGEAHALSAFIISGLVAVLAIFGL
TTWIWVLFDEHVARPVERLAADLRARAHADVDQGIDQDVARYLGDLAPAANAVTTNLTET
RNAMALAVGRETARLTTEKTRLETLLAEMPDGVLFCTPQHAIALYNGQCRDILGTSEALG
LGRPVAGLLRMGPIRQAYERLRASTSPDEGTDILVTTRTDARLLEARLRLLRLEGQETDG
PGYILTLRDVSADLKLQAERAHLLTDMLEGVTDALPDLPDGSAKTALTALVARITPRKIA
TDTQWWPMERLAATDLGAALTARLAAQGTPLAPDLDTTLLRCDGFAITRLLERLALDWTA
TGAKDLALTLASTTPDTAILSLEAASPAPADPARWLATPLSPGLTGFTGADVLLSHGTAL
TAEPAGPGRHALRLTLPLAAPRAMGPSRSVLYDFDLLNADIPDDLAAAALKSLSFVIFDT
ETTGLNPQVDEICQIAAVRLVNGKIVPGERFDMLVNPGRRIPAASTAVHHITNEMVTDAA
PVAEALARFHTFAAGSVLVAHNAPFDMSFLRRRETEIGQRFDQPILDTVLCSAILYGQSA
EHTLDALCARLHIQIPEADRHTAIGDAIGTAEAFRKMIPMLEAAELPNLGALIRAFDRHS
RLIEHLN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgttcacccggctatccctgcgcctgcgcatcttcctgttcttcgccctgatcgcgctc
ggcggctccgccctcgtcgtgacgggcctcgtcatcggctacatacggctgggcgaagcc
catgccctcagcgccttcatcatctcgggccttgtcgccgtcctcgccatcttcggcctg
acgacctggatctgggtgctcttcgacgaacatgtcgcccgccccgtggaacggctggcc
gccgatctgcgcgcccgcgctcatgccgatgtcgaccagggcatcgatcaggatgtcgcc
cgctacctcggcgatctcgcccccgccgccaatgccgtcaccaccaacctgaccgaaacc
cgcaacgccatggcgctggccgtgggccgcgaaaccgcgcggctgaccaccgaaaagacc
cggctcgaaacgctcctggccgaaatgcccgatggcgtcctcttctgcacgccccaacac
gccatcgcgctctacaacggccagtgccgcgacattctcggcacctccgaggcgctgggg
ctcggccgcccggtcgcgggcctcctgcgcatgggcccgatccggcaggcctatgagcgc
ctccgcgccagcacctcgccggacgaaggcaccgatatcctcgtgaccacccgcactgac
gcccgcctgctcgaggcgcgcctgcgcctcctccgcctcgagggacaggaaaccgacggc
ccgggctatatcctgacgctccgcgacgtcagcgccgacctcaagcttcaggccgaacgc
gcccatcttctgaccgacatgctggagggcgtcaccgacgccctgcccgacctgcctgac
ggatccgcgaaaaccgccctcacggcccttgtcgcccgcatcaccccccgcaagatcgcc
accgacacccaatggtggccgatggaacgcctcgccgccaccgatctcggcgcggcgctc
accgcccggctcgcggcacagggcacgcccctcgcccccgatctcgacacgaccctcctg
cgctgcgacggcttcgccatcacccggcttctcgaacgcctcgcgctggactggaccgcc
acgggggccaaggatctcgccctcacgctcgcgtccaccacgcccgacacggcaatcctc
agcctcgaagcggcaagccccgcccctgccgatcccgcgcgctggctcgccaccccgctt
tcccccggcctcacgggcttcaccggggccgatgtgctgctgagccacggcaccgccctc
accgccgaacccgcaggccccggtcgccacgcgctccgcctcacgctgccgctcgccgca
ccccgcgccatgggcccctcgcgcagcgtgctctacgatttcgacctcctgaacgccgac
atccccgacgatctcgccgcagccgcgctcaaatccctcagcttcgtcatcttcgacacc
gaaaccaccggcctcaatccgcaggtcgacgagatctgccagatcgccgccgtgcgcctc
gtcaacggcaagatcgttccgggcgaacgcttcgacatgctcgtcaacccgggccgccgc
atccccgccgcctccaccgccgtccatcacatcaccaacgagatggtcacggatgccgcc
cccgtggccgaggccctcgcccgcttccacaccttcgccgcaggcagcgtgctcgtcgcc
cataacgcacccttcgacatgagcttcctgcgccgccgcgagaccgagatcggccagcgc
ttcgaccagccgatcctcgacaccgtgctctgttccgcgatcctctacggccaatccgcc
gaacacacgctcgacgcgctctgcgcccggctccacatccagatccccgaggccgaccgg
cacaccgccatcggcgatgccatcggcacggccgaggccttccgcaagatgatcccgatg
ctggaagcggcagagctgcccaatcttggggcactcatccgcgccttcgaccgccacagc
cgcctgatcgagcatctgaattga
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