Roseicyclus marinus: MACH21_12130
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Entry
MACH21_12130 CDS
T09703
Symbol
ymfC
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
rmai
Roseicyclus marinus
Brite
KEGG Orthology (KO) [BR:
rmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmai03009
]
MACH21_12130 (ymfC)
Enzymes [BR:
rmai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
MACH21_12130 (ymfC)
Ribosome biogenesis [BR:
rmai03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MACH21_12130 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BDW85036
UniProt:
A0AA48KME7
LinkDB
All DBs
Position
1271062..1271643
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AA seq
193 aa
AA seq
DB search
MSRPRPRPRTPKGETRLIAFNKPMDVLSQFTDDGHWPGLKRWLDMPGMYPAGRLDRDSEG
LLLLTNDGILQARLTDPKSHTPKTYFALVEGMPTPSALEALRLGVTLKDGPTRPARVEEV
AAPSWLWPRDPPVRFRANIPEAWLKLTITEGRNRQVRRMCAHVGLPVLRLIRWSVGPHTV
EGLPPGGWKALQP
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgcccgcgcccaagacccaggacgcccaagggcgagacgcggctgatcgcgttc
aacaagccgatggatgtcttgagccaattcaccgatgacgggcattggccggggctgaaa
cgttggctcgacatgccggggatgtatccggcgggcaggctcgatcgcgacagcgagggg
cttctcctgctcaccaatgacggcatcttgcaggcgcggttgaccgatccgaaatcgcac
acgcccaagacctatttcgccctcgtcgaaggcatgcccacgccttcggcgctcgaggcg
ctgcgccttggcgtgacgctcaaggacgggccgacaagacccgcacgggtcgaggaggtg
gccgcgccctcttggctctggccccgcgatcccccggtgcggttccgcgcgaacatcccc
gaggcctggctgaaactgaccataaccgagggccgcaaccgacaggtccggcgcatgtgc
gcccatgtgggcctgccggttctgcgcctcatacgctggtccgtcgggccccatacggtc
gagggcctgccgcccggcggctggaaggcccttcaaccctga
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