Roseicyclus marinus: MACH21_19990
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Entry
MACH21_19990 CDS
T09703
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rmai
Roseicyclus marinus
Brite
KEGG Orthology (KO) [BR:
rmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmai03400
]
MACH21_19990
Enzymes [BR:
rmai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MACH21_19990
DNA repair and recombination proteins [BR:
rmai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MACH21_19990
Prokaryotic type
MACH21_19990
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDW85822
UniProt:
A0AA48H8Q4
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All DBs
Position
complement(2109659..2111197)
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AA seq
512 aa
AA seq
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MSADVLVWFKRDLRVQDNPVLAQAAARGGRVLPLFIVEPEGWAQPDASARQWRFVAESLG
ALREDLARLGAPLIVRVGPASEVLAGLLAATGIREVVSLEETGNGWSYARDRAVAGMLGA
MGVAWHELPQMGVIRRLKGRDGWAARRDRVIRGAQVPVPEAIQGFDLDPGQIPEARDLSL
AFDPCPGRQKGGRAEALGLLSSFLETRGRDYRRAMSSPLEGATACSRLSPHLAWGTISAR
EAAEAAALRKRQAKGTREGWSGAMQSFEARLAWRDHFMQKLEDEPALEHRCLHSAYEGLR
GDDAVRRAAWEAGETGFPFVDACMRSLNATGWLNFRMRAMLVSFASYHLWLDWRATGPHL
ARMFTDYEPGIHWSQMQMQSGTTGMNTVRMYNPVKQGLDQDPTGAFTRHWCPELRELPDA
FLQEPWRWEGAGRILGKRYPVPVIDLVQAGRAAREKVWGLRHGDAFRSEAARIVEKHASR
KDGGAGRHFVNDRSPKKARRGGGGAGQLSLDL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggatgttcttgtttggttcaagcgtgacctgcgggtgcaggacaacccggtg
ttggcccaagcggcggcgcgggggggtcgtgtgctgccgctgttcatcgtggagccggag
ggatgggcgcaacctgacgcctcggcccggcaatggcggttcgtggccgagagccttggg
gcgctgcgcgaggatctggcgcggctcggcgccccgctgatcgtccgggtgggaccggcg
agcgaggtgctggcggggcttctcgccgcgacgggcatccgcgaggttgtgagcctcgag
gaaaccggcaatggctggagctatgcgcgcgaccgggccgtggcggggatgctgggcgcg
atgggcgttgcctggcacgagctgccgcaaatgggggtcatccggcggctgaagggccgc
gacggttgggccgcgcggcgcgaccgggtgatccggggcgcgcaggtgcccgtgccggag
gcgatccagggctttgacctcgaccccggacagatcccggaggcgcgcgatctgtccctt
gcctttgacccctgccccggtcggcagaaggggggcagggcagaggcgctggggcttttg
tcctcgttcctcgagacccgtggccgcgactatcggcgcgccatgtcctcgccgctcgag
ggggctacggcctgttcgcggctcagtccgcatctggcctggggcacgatctcggcgcgc
gaggcggcggaggcggcggcgctgcgcaaacggcaggccaagggcacgcgcgaaggctgg
tcgggcgcgatgcagagtttcgaggcgcggctcgcctggcgcgatcatttcatgcagaag
ctggaggatgagcccgcgctggaacatcgctgcctgcattcggcctatgaggggttgcgg
ggcgatgatgccgtgcggcgcgcggcctgggaggcgggggagacgggttttccctttgtc
gatgcctgcatgcggtcgctgaatgcgacgggctggctcaatttccggatgcgggcgatg
cttgtgtcctttgcgagctatcacctgtggctcgattggcgggccacagggccgcatctg
gcgcggatgttcaccgattacgagccgggcatccattggtcgcagatgcagatgcaatcg
ggcacgacgggcatgaacacggtcaggatgtacaacccggtgaaacaggggctggaccag
gacccgaccggggcattcacccggcactggtgtcccgaattgcgcgagctgcccgacgct
ttcttgcaggagccgtggcgctgggagggggcagggcgcatcctgggcaagcgctatccg
gtgccggtcatcgacctggtccaggcgggccgggcggcgcgcgaaaaggtctggggcctg
cgccacggcgatgcctttcggtcggaggcggcgcggatcgtcgaaaagcacgcaagccgc
aaggatgggggcgcggggcggcacttcgtcaatgaccgaagcccgaaaaaggcgcggcgc
ggcgggggcggggcggggcagttgagcctcgatctgtga
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