Roseicyclus marinus: MACH21_28220
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Entry
MACH21_28220 CDS
T09703
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
rmai
Roseicyclus marinus
Pathway
rmai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rmai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MACH21_28220 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmai03400
]
MACH21_28220 (uvrB)
DNA repair and recombination proteins [BR:
rmai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MACH21_28220 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MACH21_28220 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
AAA
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
BDW86645
UniProt:
A0AA48H8B9
LinkDB
All DBs
Position
2948493..2950685
Genome browser
AA seq
730 aa
AA seq
DB search
MHNNSPQSMPDTGLSVDAVRARPKLEGGRRFVMQTEFKPAGDQPRAIAELSQGVLGGDRD
QVLLGATGTGKTFTMAKVIEQTQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSYYD
YYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETY
GAMTQDLFAGRQYDQRKVMADLVAQQYRRNDQAFQRGSFRVRGDSLEIWPAHLDDRAWRL
SFFGEDLESITEFDPLTGHKTDTFDKVRLYANSHYVTPRPTMQQAIKGIKEELRQRLDQL
VGEGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEYIPDNAI
VFADESHVTVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVYVSA
TPAAWELEQAGGVFVEQVIRPTGLLDPVVEIRPVEMQVDDLLDEIRKVAARGFRTLVTTL
TKRMAEDLTEYLHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPE
CGLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVIMYADRITGSMERALRETDRRRQK
QIAYNEEHGITPATVKKNVEDVLAGLYQGDTDMNRVTAKVDKPMVGANLAAHLDGLRAQM
RKAAENLEFEEAARLRDEVKRLEAVELAVADDPLARQSAVEEAVDEAQRMKGRSTAGRPG
QRGGKARRGR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacaactccccccaatcgatgcccgacaccggcctgtcggtcgatgcggtccgc
gcccgccccaagctcgaaggcgggcggcgcttcgtcatgcagaccgaattcaaacccgca
ggcgaccagccccgcgccatcgccgaactgtcgcagggcgttctgggcggcgaccgcgac
caggtgcttctgggcgcgaccggcaccggcaagaccttcaccatggccaaggtgatcgaa
caaacccagcgccccgcgatcatcctcgccccgaacaagacgctcgccgcccagctttac
ggcgaattcaaagggttcttccccgaaaacgccgtcgaatatttcgtcagctactacgat
tactaccagcccgaagcctatgtggcacgctccgacacctacatagagaaagaaagccag
atcaacgaacagatcgaccggatgcgccattccgcgacccgggcgcttctggaacgcgac
gacgtgatcatcgtggcctcggtctcgtgcatctacggcatcggctcggtcgaaacctat
ggcgcgatgacccaggatctgttcgcgggccgccagtatgaccagcgcaaggtcatggcc
gatctcgtggcccagcaataccgccgcaacgaccaggcgttccagcgcggctccttccgc
gtgcgcggcgactccttggaaatctggcccgcccacctcgacgatcgcgcctggcggctg
tccttcttcggcgaggatctggaatcgatcaccgaattcgacccgctgaccggccacaag
accgacactttcgacaaggtgcgcctctacgccaattcccactacgtcacgccccgcccc
acgatgcagcaggcgatcaaggggataaaggaagagctgcgccaacgcctcgaccagctc
gtgggcgagggcaaactgctcgaggcccagcgcctcgaacagcgcaccaatttcgacctc
gaaatgctcgaggcgacgggcgtctgcaacgggatcgagaattattcccgctatctcacg
ggccgcgccccgggcgaaccgccccccacgcttttcgaatacatccccgacaatgccatc
gtcttcgcggatgaaagccacgtcaccgtgccccagatcggcggcatgtatcgcggcgac
taccggcgcaaattcacgctggccgaacacgggttccgcctgccctcctgcatggacaac
cgccccctcaaattcgaggaatgggacgcgatgcgcccgcaatcggtctatgtctcggcc
acccccgcggcatgggaactggaacaggcgggcggcgtgttcgtcgaacaggtgatccgc
cccacgggccttctggacccggtcgtcgaaatccgccccgtcgagatgcaggtagacgat
ctgctcgacgaaatccgcaaggtcgcggcccgtggcttccgcacgcttgtgaccacgctg
accaagcgcatggccgaggatctgaccgaatacctccatgaacagggcatccgcgtccgt
tacatgcattccgacatcgacacgatcgaacggatcgagatcctgcgcgacctgcggctc
ggggccttcgacgtgctgatcggcatcaacctgctgcgcgaaggcctggacattcccgaa
tgcgggctcgtggccatcctcgatgccgacaaggaaggcttcctgcgctccgaaacttcg
ctgatccagaccatcgggcgcgccgcgcgcaacgccgaggggcgcgtgatcatgtatgcc
gaccgcatcaccggctcgatggaacgcgccttgcgcgaaaccgaccggcggcggcaaaaa
cagatcgcctataacgaggaacacgggatcacgcccgcgacggtgaaaaagaacgtggag
gatgttctggcgggcctctaccagggcgacaccgacatgaaccgcgtcacggccaaggtc
gacaagcccatggtgggcgcgaacctcgccgcccatctcgacgggctgcgcgcccagatg
cgcaaggccgccgagaacctcgaattcgaggaagcggcacggctccgggacgaggtcaaa
cggttggaggcggtggaactggccgtggccgacgaccctttggcgcggcaatcggcggtg
gaggaagcggtggacgaggcccagaggatgaagggccgctcaaccgccggccgcccgggg
cagcggggtgggaaggcgagaagggggcggtga
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