Roseicyclus marinus: MACH21_30700
Help
Entry
MACH21_30700 CDS
T09703
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rmai
Roseicyclus marinus
Brite
KEGG Orthology (KO) [BR:
rmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmai03016
]
MACH21_30700
Enzymes [BR:
rmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MACH21_30700
Transfer RNA biogenesis [BR:
rmai03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MACH21_30700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
MINDY_DUB
Corona_NS2A
Motif
Other DBs
NCBI-ProteinID:
BDW86893
UniProt:
A0AA48KLH0
LinkDB
All DBs
Position
complement(3178174..3178713)
Genome browser
AA seq
179 aa
AA seq
DB search
MRAFLAIPIPEDVAGDLIRLQSSVPFGRAVPEENLHLTLDFLEDAPEAALEDLHDLMTGL
RAGAVDIRFTGLDSFTEGARGLVFAAVERTEALQALHDRIASLCRAAGLDLPRRRFRPHV
TLTRANHRPDGTARDRLTASLGPVPGLLGFTARAVTLYQSSLTPRGAVHDPLVVYPLGG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcctttctcgccatcccgatcccggaggatgtggcgggtgatctgatccggctg
caatcctcggtgccttttggccgtgcggtgccggaagaaaacctgcacctgacgctggac
tttctggaagatgcgcccgaagccgcgctggaggatctgcacgatctgatgacgggtttg
cgcgcgggcgcggtcgatatccggttcacggggctcgacagtttcaccgaaggcgcgcgg
gggcttgtctttgccgccgtcgagcggaccgaggcgctgcaggcccttcacgaccggatc
gccagcctgtgccgggcggcggggctggacctgccgcgccgaaggttccggccccatgtc
acgctaacgcgcgccaatcacaggcccgatggcacggcccgcgaccggttgacggcaagc
cttgggcctgtgcccggcctgctggggttcaccgcgcgggctgtcacgctctaccagtcg
agcctgacgccgaggggcgctgtccatgaccctttggtggtctatccgctgggcggctga
DBGET
integrated database retrieval system
