Rubrobacter marinus: GBA65_03490
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Entry
GBA65_03490 CDS
T07670
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rmar
Rubrobacter marinus
Pathway
rmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBA65_03490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmar03019
]
GBA65_03490
03009 Ribosome biogenesis [BR:
rmar03009
]
GBA65_03490
Enzymes [BR:
rmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GBA65_03490
Messenger RNA biogenesis [BR:
rmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GBA65_03490
Ribosome biogenesis [BR:
rmar03009
]
Prokaryotic type
rRNA helicases
GBA65_03490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
YhaO_M
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QIN77732
UniProt:
A0A6G8PUE0
LinkDB
All DBs
Position
712195..713352
Genome browser
AA seq
385 aa
AA seq
DB search
MVETYAPNEARGASFTDLPVSDGIRKAVSDQGWETPTPIQALALPALLDGEDVVGMAQTG
SGKTAAFSIPLIEAVGPKARGVRALVLLPTRELAAQAAREIESLSKYAPVRPIVLCGGVS
IGPQIKALKSRSNSVVVGTPGRILDHLNRGTLDLKAVSYLVLDEADRMLDMGFAPDVGRI
LSHTPKDRQTALFSATMPKEIRGIVGRHMRSPRWLKVESETTTVDTVEQVYYRVGGRDKT
RVLRALLDAEEKPLAIVFRRTKHGATKLHRQLEREGYRAGLLHGGKSQSQRDKTLAAFSK
GRTEILVATNVAARGLDVPNVSHVFNYDLPEDLETYVHRIGRTARAGKDGIAATLVGDAE
VRDFEKIRRALPVEVRESEPPLSAA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaacctacgctccgaacgaggcccgcggggcctccttcaccgacctacccgtc
tccgacggtatccgtaaggcagtatcggatcagggctgggagaccccgacgcccatccag
gcgctggcgctgcccgcgctcctcgacggcgaggacgtcgtcggcatggcccagaccggc
agcggcaagaccgccgcgttctcgatccccctcatagaggccgtcgggccgaaggcgcgc
ggcgtccgggcgctcgtgctgctgccgacgcgcgagctcgccgctcaggcggcccgggag
atcgagagcctgtccaagtacgccccggtgcgcccgatcgtcctgtgcggcggcgtctcg
atagggccccagatcaaggcgctcaagagccgctccaactcggtggtcgtcgggacgccc
gggcgcatcctcgaccatttgaacaggggcacgctcgacctgaaggcggtgagctacctc
gtgctcgacgaggccgacaggatgctcgacatgggcttcgcccccgacgtcggccgcatc
ctctcgcacacccccaaggaccgccagaccgccctgttctcggcgacgatgccgaaggag
atccggggcatcgtcgggcgccacatgcgctccccgcgctggctcaaggtcgagtccgag
acgacgaccgtggacacggtcgagcaggtctactaccgggtcggcggccgcgacaagacg
cgcgtcctcagggccctcctcgacgccgaggagaagccgctggcgattgtgttccgccgc
acgaagcacggggcgacgaagctgcaccgccagctcgagcgcgagggctacagggcgggc
ctcctgcacggcggcaagtcccagtcgcagcgcgacaagacgctcgccgccttctccaag
gggcggacggagatcctcgtggccacgaacgtggccgcgcgcggcctcgacgtcccgaac
gtctcccacgtcttcaactacgacctcccggaggacctggagacctacgtgcaccgcatc
ggccgcacggcgcgggcgggcaaggacgggatcgcggcgacgctcgtcggcgacgccgag
gtgagggacttcgagaagatccggcgcgccctccccgtcgaggtgcgagagagcgagccg
cccctctccgcggcctag
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