Rubrobacter marinus: GBA65_04130
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Entry
GBA65_04130 CDS
T07670
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rmar
Rubrobacter marinus
Pathway
rmar00300
Lysine biosynthesis
rmar00470
D-Amino acid metabolism
rmar01100
Metabolic pathways
rmar01110
Biosynthesis of secondary metabolites
rmar01120
Microbial metabolism in diverse environments
rmar01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rmar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GBA65_04130
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GBA65_04130
Enzymes [BR:
rmar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GBA65_04130
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF5559
Motif
Other DBs
NCBI-ProteinID:
QIN77842
UniProt:
A0A6G8PUJ9
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All DBs
Position
complement(842609..843937)
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AA seq
442 aa
AA seq
DB search
MRTQIDKAHDLAERFGGWKDGVLAPGGVKVSDIAAEHGTPFYLYHGEMIVDRVRRVREAL
GGDVEVTYSVKANPNLAVTQVIAREHLTGAEVASSGELVVARTAGFEPEDIVFAGPAKTD
EELEMAVREGIFAVNVESVNEINRLAAVAERHDKNIGVGLRINPAQQLMGSGMRMGGTVG
QFGLDEADLEEAVRRTLAHPEHMTLRGIHVYTATQVFEVDPLIEHCRNIFELALKTADLA
GRPLEMVDFGGGFGVPYFEKLEEFDLERFGAGFQELLAHYRTDPRLEGCRFVFELGRYLV
ADAGLYVTKVIDVKDMKGKTFVTTDGGMNHHLTATGNMGQVFRKAYPILNLSRSPGEGEP
VALAGPCCTPLDMFGTNIPLADPEPGDLVGVFYSGAYGFSASNLGFLSHPNPAEILIWQG
EARLLRPVGKPEDVLKGQEALV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacgcagatagataaggcccacgacctggccgagcgcttcggcggctggaaggac
ggcgtgctcgcccccggcggcgtcaaggtctcggacatcgccgccgagcacggcaccccg
ttctacctgtaccacggcgagatgatcgtggaccgggtccggcgcgtccgggaggccctc
ggcggcgacgtcgaggtgacgtactccgtcaaggcgaacccgaacctcgccgtgacgcag
gtgatcgcgcgggagcacctcaccggggcggaggtcgcctcctccggcgagctcgtggtc
gcgaggaccgccgggttcgagcccgaggacatcgtcttcgccggcccggccaagaccgac
gaggagctcgagatggcggtgcgcgaggggatcttcgcggtcaacgtcgagtcggtgaac
gagatcaaccgcctggcggcggtcgccgagcgccacgacaagaacatcggcgtcggcctg
cgcataaacccggcccagcagcttatgggttccgggatgcgcatgggcggcacggtcggg
cagttcggcctggacgaggccgacctcgaggaggcggtccgccgcaccctcgcccacccc
gagcacatgacgctccgcggcatccacgtctacacggcgacccaggtcttcgaggtcgac
ccgcttatagagcactgccgcaacatcttcgagctcgccctgaagacggccgacctcgcc
ggacggccgctcgagatggtcgacttcggcggcggcttcggggtcccgtacttcgagaag
ctcgaggagttcgacctggagcgcttcggcgcggggttccaggagcttctcgcccactac
cgcacggacccgcgcctcgaagggtgccggttcgtcttcgagctcggccgctacctcgtc
gccgacgcggggctgtacgttacgaaggtgatcgacgtcaaggacatgaagggcaagacc
ttcgtgaccaccgacggcgggatgaaccaccacctcaccgcgaccgggaacatgggccag
gtcttcaggaaggcgtacccgatcctgaacctctcccgctcccccggcgagggcgagccc
gtcgcgctcgccggcccctgctgcacgccattggacatgttcgggacgaacatcccgctc
gcagaccccgagcccggcgacctcgtcggcgtcttctacagcggggcctacggcttcagc
gcgagcaacctcggtttcttgagccacccgaacccggccgagatcctcatatggcagggc
gaggcgcggctcctacgccccgtcggcaagcccgaggacgtcctcaagggccaggaggcg
ctggtctag
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