Rubrobacter marinus: GBA65_05600
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Entry
GBA65_05600 CDS
T07670
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rmar
Rubrobacter marinus
Pathway
rmar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GBA65_05600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmar03021
]
GBA65_05600
03400 DNA repair and recombination proteins [BR:
rmar03400
]
GBA65_05600
Enzymes [BR:
rmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GBA65_05600
Transcription machinery [BR:
rmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GBA65_05600
DNA repair and recombination proteins [BR:
rmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GBA65_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QIN78074
UniProt:
A0A6G8PV57
LinkDB
All DBs
Position
1114780..1118664
Genome browser
AA seq
1294 aa
AA seq
DB search
MQGLERDIDINKLEKISIGLTSADEIREWSRGEVTKPETINYRTLRPEKDGLFCERIFGP
SKDWECYCGKYKRIRFKGIICERCGVEVTRARVRRDRMGHIELAAPIAHVWFVKGVPSRM
GYLLDISPKDLDRVLYFASSIVTWVDREERANDIDALRGQVEDEIRGLEEERDEEVMQTQ
ALRTKRESVIKGESSPDEFTEDLAEIEEEEREATIARVHKEAEETVQDIQRSVQEQIDLV
RRAWEEFQTLEPRQIVDDEELFREMRDRFGDEYGYGVYFRGGMGAEAVRDLIMQVDLEDE
AEELREMVNEAKGQKRQKAIKRLKVVDAFRVSENNPAWMIMDAVPVLPPDLRPMVQLDGG
RFATSDLNDLYRRVINRNNRLRRLLDLGAPDVIVNNEKRMLQEAVDALFDNGRRGRAVTG
AGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLEMHQCGLPRLMAVELFK
PFVMKVLVDRALAPNIRSAKQMVERLRPEVWDVLEDVIKEHPVLLNRAPTLHRLGIQAFE
PVLVEGKAIQVHPLVCAAFNADFDGDQMAVHVPLSPEAQAEARVLMLSTQNILLPANGFP
IAVPSQDMVLGLYYITYGDDDFDEQDPKAFISSYDEAEAAYKEGSLKIHDKVLLRRSGGK
VATTLGRAMFNRNVEETLKGYLGEAYDPAEYEFVNETLKKGEIKSLVSAYVDRYPTELVS
QLLDTLKRVGFHTATKAGVSIGKNDIVVPEQKAGILEKYDGLVEEVEEQWDSGFISDDER
LERVIAMWTQAKNEVEAAMKANLYKLNPIFMMANSGARGNYSQITQLAGMRGLMTNTKGE
IIDEPVKSNFMEGLSVLEYFTSTHGARKGQADTALRTADSGYLTRRLVDVSQDVVVNEAD
CGSTGYIDIPLYLDGGRGDANDSVAARFLARDLVNPETGEVVAEAGTDITPRVASEWQEI
LPKTTMVSVRTPSKCESAQGVCQACYGRALSTYRPVDVGEAVGIIAAQSIGEPGTQLTMR
TFHTGGIAGEDITAGLPRVVELFEARHPKAEATLADIDGYVTLDEADNDRMIKVTLTSGD
GTESRDYVVERQLLRPEFTEGAEVTANTPITEGSVYPHQILENDQRYDRGTTATERYIVE
EVQKVYRTQGVDIHDKHIEVIVRQMLRKVVVDNPGDTNLLPEQVADKFTVLAENARVEEE
DGTPATFHTVLMGITKASLATDSFLSAASFQETARVLTDAAIEGKVDGLAGLKENVIIGK
LIPAATGMPQYRQLTVSVEGYGAREVEDLDIAAS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
gtgcagggtctagagcgcgacatagatatcaacaagcttgaaaagatctccatcggcctc
acgtcggccgacgagatccgcgagtggtctcgcggcgaggtgacgaagccggagactatc
aactacaggacgctgcgtccggagaaggacgggctgttctgcgagcgcatcttcggtccc
tccaaggactgggagtgctactgcggcaagtacaagaggatccgcttcaagggcatcatc
tgcgagcgctgcggcgtcgaggtgacccgcgcccgcgtgcgccgcgaccggatgggccac
atcgagctggccgccccgatcgcgcacgtgtggttcgtgaagggcgtgccgagccggatg
ggctacctcttggacatcagcccgaaggacctcgaccgggtgctgtacttcgcctcgtcc
atcgtgacgtgggtggaccgcgaggagcgggccaacgacatcgacgcgcttcgcgggcag
gtggaggatgagatccgcgggctcgaggaggagcgcgacgaggaggtcatgcagacgcag
gccttgcgcaccaagcgcgagagcgtcatcaagggcgagagctccccggacgagttcacc
gaggaccttgcggagatagaggaagaggagcgcgaggcgacgatagcccgcgtccacaag
gaggccgaggagaccgtccaggacatccagcgctccgtgcaggagcagatcgacctggtc
aggcgcgcctgggaggagttccagacgctggagccccgccagatcgtggacgacgaggag
ctcttccgcgagatgcgggaccgcttcggcgacgagtacggctacggcgtgtacttccgt
ggcggcatgggggcggaggccgtccgcgacctcatcatgcaggtcgacctcgaggacgag
gccgaggagctccgggagatggtcaacgaggccaagggccagaagcgccagaaggcgatc
aagcggctcaaggtcgtcgacgccttccgcgtgagcgagaacaacccggcgtggatgatc
atggacgccgtcccggtgctgccgccggatctccgcccgatggtccagctcgacggcggc
cgcttcgcgacctccgacctgaacgacctgtaccggcgcgtcatcaacaggaacaacagg
cttcgccgcctgctggacctcggcgccccggacgtgatcgtgaacaacgagaagcggatg
ctccaggaggccgtcgacgctctgttcgacaacggccgccgcggccgcgccgtgacgggc
gccggcaaccgcgccctgaagtccctgagcgacatgctcaagggcaagcagggcaggttc
cgccagaacctgctcggcaagcgcgtggactactcggggcgttccgtgatcgtggtcggt
ccgaacctggagatgcaccagtgcggcctgccgcgcctcatggcggtcgagctcttcaag
ccgttcgttatgaaggtgctcgtcgaccgggcgctcgccccgaacatccggagcgcgaag
cagatggtcgagaggctgaggcccgaggtgtgggacgtcctcgaggacgtcatcaaggag
cacccggtgctcctcaaccgcgccccgacgctgcacaggctcggcatccaggcgttcgag
ccggtgctggtcgagggtaaggctatacaggtccacccgctcgtgtgcgcggcgttcaac
gccgacttcgacggcgaccagatggccgttcacgtgccgctgagcccggaggctcaggcc
gaggcgcgcgtcctgatgctctcgacgcagaacatcctgctgccggcgaacgggttcccg
atcgcggtgccgtcgcaggacatggtgctcgggctctactacatcacctacggcgacgac
gacttcgacgagcaggacccgaaggcgttcatctcgtcctacgacgaggccgaggcggcg
tacaaggagggctcgctcaagatccacgacaaggtcctcctccgtcggagtggcggcaag
gtcgcgaccacgctgggccgggcgatgttcaaccgcaacgtcgaggagacgctcaagggc
tacctcggcgaggcgtacgatccggccgagtacgagttcgtcaacgagacgttgaagaag
ggcgagatcaagtccctcgtctccgcgtacgtggaccgctacccgacggagctcgtcagc
cagcttctcgacaccctcaagagggtcgggttccacacggcgacgaaggccggcgtctcc
atcggcaagaacgacatcgtcgtgccggagcagaaggccggcatcctggagaagtacgac
ggcctcgtcgaagaggtcgaggagcagtgggactcgggcttcatctccgacgacgagcgc
ctcgagcgggtcatcgcgatgtggacgcaggcgaagaacgaggtcgaggcggccatgaag
gccaacctctacaagctcaacccgatcttcatgatggcgaactcgggcgccaggggtaac
tactcccagatcacgcagctcgccggcatgcgcggcctcatgacgaacacgaagggcgag
atcatcgacgagcccgtgaagtccaacttcatggagggcctctcggtcttggagtacttc
acctcgacgcacggcgcccggaagggccaggccgacacggcgctccgtacggccgactcg
ggctacctcacccgtaggctcgtggacgtctcccaggacgtcgtcgtgaacgaggccgac
tgcggctcgaccggctacatcgacataccgctctacctcgacggcggcaggggcgacgcg
aacgactccgtcgcggcccgcttccttgcccgcgacctcgtgaacccggagacgggcgag
gtcgtcgccgaggcggggacggacatcaccccgcgcgtggcctccgagtggcaggagatc
ctgccgaagaccaccatggtctccgtgaggacgccgtccaagtgcgagagcgcgcagggt
gtgtgccaggcctgctacggccgggcgctctcgacctaccgtcccgtggacgtgggcgag
gccgtcggcatcatcgcggcccagtccatcggtgagccggggacgcagcttacgatgcgt
accttccacaccggcggtatcgccggcgaggacatcacggccggcctgccgagggtcgtc
gagctcttcgaggctcgtcacccgaaggccgaggcgacgctcgccgacatcgacgggtac
gttaccctcgacgaggccgacaacgaccggatgataaaggtcaccctcacctccggggac
ggtacggagagccgcgactacgtggtcgagcggcagcttctcaggccggagttcacggaa
ggggcggaggttacggccaacaccccgatcacggagggctcggtctacccgcaccagatc
ctcgagaacgaccagcgctacgaccgcggcacgaccgcgacggagcggtacatcgtcgag
gaggtgcagaaggtctaccggacgcagggcgtggacatccacgacaagcacatcgaggtg
atcgttcgccagatgctgcgcaaggtcgtggtggacaacccgggcgacacgaacctcctg
ccggagcaggtggccgacaagttcacggtcctggccgagaacgcgcgggtcgaggaggag
gacggtacgccggccaccttccacacggtcctcatggggatcacgaaggcctcgctcgcc
acggacagcttcctctccgcggcctccttccaggagacggcccgcgtcctcacggacgcc
gccatcgagggcaaggtcgacgggctcgcgggcctcaaggagaacgtgatcatcggcaag
ctgatcccggcggccaccggcatgccgcagtaccgccagctcacggtctccgtcgagggc
tacggtgcccgggaggtcgaggacctcgacatagccgcttcgtag
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