Rubrobacter marinus: GBA65_06720
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Entry
GBA65_06720 CDS
T07670
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
rmar
Rubrobacter marinus
Brite
KEGG Orthology (KO) [BR:
rmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmar03019
]
GBA65_06720
Messenger RNA biogenesis [BR:
rmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GBA65_06720
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QIN78252
UniProt:
A0A6G8PVM1
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Position
1325674..1326621
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AA seq
315 aa
AA seq
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MAPRTTFLATDASVRTDSRGVPYLSVSLVDKTGSVDARMWRLPQELKEGLDGPEYVYVEG
NAHEYRGMLQLKIERMRVLGPGEVEEEDYLPATEKDRKTLADELLEVGLSFEDAYLGELF
ARIVDDEGLWEAFCAAPAAKTMHHARIGGLLEHSVQCMRVAKEIAELYPVNRDLLLFGTI
FHDVGKTRELSWGNGGFAYTTVGRLQGHVVLGDRIVAAKVAEIPGFPEDLALQLSHLMLS
HQGEKEYGSPEQPKTLEALLVNLIDNLDARTAMFLETTKNVSAGGWSHHENPLRRALHVP
EEAADDDGNARADAP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggccccgcgcaccacgtttctggcgacggacgcgagcgtgcgcacggacagccgcggc
gtcccttacctctcggtctccctcgtggacaagaccggctccgtcgacgcccggatgtgg
cgcctgccccaggagctcaaggaggggctcgacggccccgagtacgtctacgtcgagggg
aacgcccacgagtaccgcgggatgctccagctcaagattgagcgcatgagggtcctgggc
cccggcgaggtcgaagaggaggactacctgcccgccaccgagaaggaccgcaagaccctc
gccgatgagctgttggaggtaggcctctccttcgaggacgcctacctcggggagctcttc
gcgcgcatcgtcgacgacgaggggctctgggaggcgttctgcgcagcgcccgcggcgaag
acgatgcaccacgcccggataggcggcctcctcgagcactccgtgcagtgcatgagggtg
gcgaaggagatagccgagctctacccggtcaaccgggacctcctcctcttcggcacgatc
ttccacgacgtgggcaagacgcgcgagctctcctgggggaacggcggcttcgcctacacc
accgtcgggcgtctccaggggcacgtggtcctcggagaccggatcgtcgcggcgaaggtc
gccgagatcccgggtttccccgaggacctcgccctccagctctctcacctcatgctctcc
caccagggcgagaaggagtacggctcacccgagcagcccaagaccctcgaagcgctgctc
gtgaacctcatagacaacctcgacgcccgtaccgccatgttcctggagacgacgaagaac
gtctcagccggcggctggagccaccacgagaaccccctcaggcgcgccctgcacgtcccc
gaggaggccgcggacgacgatgggaacgcccgcgcggacgccccctga
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