Rubrobacter marinus: GBA65_10025
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Entry
GBA65_10025 CDS
T07670
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rmar
Rubrobacter marinus
Pathway
rmar03030
DNA replication
rmar03430
Mismatch repair
rmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GBA65_10025 (holA)
03430 Mismatch repair
GBA65_10025 (holA)
03440 Homologous recombination
GBA65_10025 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmar03032
]
GBA65_10025 (holA)
03400 DNA repair and recombination proteins [BR:
rmar03400
]
GBA65_10025 (holA)
Enzymes [BR:
rmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GBA65_10025 (holA)
DNA replication proteins [BR:
rmar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GBA65_10025 (holA)
DNA repair and recombination proteins [BR:
rmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GBA65_10025 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
YPL108W_N
Motif
Other DBs
NCBI-ProteinID:
QIN78801
UniProt:
A0A6G8PX55
LinkDB
All DBs
Position
2001687..2002604
Genome browser
AA seq
305 aa
AA seq
DB search
MAVYLLLGDDEERKARGVDKIRKGRTVEAYDAADSSPEAVVSACNSYSLFGEGSVVLVRN
LDAWNAAQKAKIVDYLGDPSPEADLVLLGKKLGAREKLLAAAKKIGEVHSFEQPTGKALA
RWAVGYAKKAELKLPEDVAAELVLRCSDDKTRVSREVEKLALYADGEATMGDVEALCPPD
LQSNIFQFVDALGAGKGGRALTLLEALLGTGEPPLRIVHMIRRQFRLLARAKALFEDGAP
RSEVASALKVPPFVARKLEEGAGRMGEEELEQALALVSDLERGLKGGSDLSDNLQVELTV
LGMAR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtttatctgttgctcggggacgacgaggagcgcaaagcccgcggggtcgacaag
atccgcaagggccggacggtcgaggcgtacgacgccgcggattcgagccccgaggcggtc
gtctcggcctgcaactcgtactcgctcttcggggagggctcggtcgtcctcgtccggaac
ctcgacgcctggaacgccgcgcagaaggccaagatcgtggactacctcggggacccctcg
cccgaggcggacctcgtcctgctcggcaagaagctcggcgcccgcgagaagctcctcgcc
gccgccaagaagatcggcgaggtacacagcttcgagcagccgaccggcaaggccctcgcc
cggtgggcggtcggctacgccaagaaggcggagctcaagctcccggaggacgtggccgcc
gagctcgtcctgcgctgctccgacgacaagacgcgcgtctcgcgcgaggtggagaagctc
gccctctacgccgacggggaggcgacgatgggggacgtcgaggcgttgtgtccgccggac
ctgcagtccaacatcttccagttcgtcgacgccctcggggcggggaagggggggcgcgcc
ctgactctcctcgaggcgctgctcgggacgggggagccgccgctgaggatcgtgcacatg
atccggcgccagttccgtctcctggcgcgcgcgaaggccctcttcgaggacggcgcaccg
cgctccgaggtcgcgagcgcgctgaaggtaccgccgttcgtcgcgcgcaagctggaggag
ggggccggcaggatgggggaggaggagctcgaacaggccctggccctggtctccgacctc
gagcgcggcctcaagggcggcagcgacctctccgacaacctgcaggtcgaactcaccgtg
ctcggcatggcccgctag
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