Rubrobacter marinus: GBA65_12035
Help
Entry
GBA65_12035 CDS
T07670
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rmar
Rubrobacter marinus
Pathway
rmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBA65_12035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmar03019
]
GBA65_12035
03400 DNA repair and recombination proteins [BR:
rmar03400
]
GBA65_12035
Enzymes [BR:
rmar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GBA65_12035
Messenger RNA biogenesis [BR:
rmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GBA65_12035
DNA repair and recombination proteins [BR:
rmar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GBA65_12035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
PTS_2-RNA
Motif
Other DBs
NCBI-ProteinID:
QIN79132
UniProt:
A0A6G8PY20
LinkDB
All DBs
Position
complement(2373361..2374473)
Genome browser
AA seq
370 aa
AA seq
DB search
MPLNVLKEIFGFDSFRPGQEGVIHAVLEGRDTLAVMPTGGGKSLCYQVPALMREGLTVIV
SPLISLMKDQVDSLLQSSVTTAATLHSGLSPEERWEVERKVRTGEIRMLYVAPERLRSLE
FVLALRRAGVGLFVVDEAHCISEWGHDFRPDYLFLPRAVRDLGSPPVLALTATATPRVRQ
DILRSLRMRDPEVVVTSFNRPNLTYRVLPVRDKDGKLPRILDVIRHTPPPGIVYGTTRKE
CEELASGLRRAGVNAAHYHAGLSPGDRTSVQERFMTDEVDVVVATIAFGMGVDKPNVRFV
VHASVPGSLPAYIQEAGRAGRDGADASCVVLYRGADLGRRKRLVTVNAAGTDEVGSFFRA
LSGVAGEGGG
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcctctaaacgtcctcaaggagatcttcggcttcgactcgttccgtcccggtcaggag
ggcgtgatccacgccgtcctcgagggccgcgatacgctggcggtgatgccgacggggggc
gggaagagcctctgctaccaggtgccggcgctcatgcgtgagggccttacggtgatcgtc
tcgcccctcatctccctgatgaaggaccaggtcgactccctccttcagagctccgtgacg
acggcggcgacgctccactccgggctctcgccggaggagcggtgggaggtcgagcggaag
gtgaggaccggcgagatccggatgctctacgtcgcccccgagcgcctgcgctcgctggag
ttcgtcctcgccctgaggcgggccggggtgggcctgttcgtcgtcgacgaggcccactgc
atctcggagtggggccacgacttccggccggactacctcttcctgccccgcgccgtccgc
gacctcggcagcccgccggtcctcgccctcaccgcgaccgcgacgccgcgcgtccggcag
gacatcctccgctccctgaggatgcgcgaccccgaggtggtcgtgacgagcttcaaccgg
ccgaacctcacctaccgcgtcctgcccgtcagggacaaggacggcaagctcccgcgcatc
ctcgacgtgatccgtcacacccccccgcccgggatcgtctacggcaccacgaggaaagaa
tgcgaggagctcgcctctgggctcaggcgcgcgggcgtcaacgccgcccactaccacgcg
gggctctcgccgggggaccgtacgagcgtgcaggagcgcttcatgaccgacgaggtcgac
gtcgtggtcgcgacgatagccttcggcatgggcgtggacaagccgaacgtgaggttcgtg
gtgcacgcgagcgtcccggggagcctgccggcgtacatccaggaggcggggagggcgggg
cgcgacggggcggacgcgtcctgcgtcgtcctgtaccggggcgcggacctcgggcggcgc
aagcggctcgtgacggtgaacgcggccggcaccgacgaggtcggatctttcttccgcgcc
ctctccggggtcgcgggggaggggggcgggtga
DBGET
integrated database retrieval system
