Rubrobacter marinus: GBA65_13825
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Entry
GBA65_13825 CDS
T07670
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rmar
Rubrobacter marinus
Pathway
rmar03410
Base excision repair
rmar03430
Mismatch repair
rmar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GBA65_13825
03430 Mismatch repair
GBA65_13825
03440 Homologous recombination
GBA65_13825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmar03400
]
GBA65_13825
DNA repair and recombination proteins [BR:
rmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GBA65_13825
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GBA65_13825
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GBA65_13825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
LuxC
Motif
Other DBs
NCBI-ProteinID:
QIN79409
UniProt:
A0A6G8PYV7
LinkDB
All DBs
Position
complement(2729955..2731478)
Genome browser
AA seq
507 aa
AA seq
DB search
MPLCIMRVVASICRGGDGLAEWRLLEPGADVVAELKRAAEVDELCARVLANRGVDAGAAL
GFLSPSLKAIGAPEEEAWRVAARRVARAVRGGERIGIFGDYDTDGITSSAVLYLALSRYT
NNLAVKLPTRQTGYGLLEPYVRDLFADGVDLVVTADCGISNRAGVEIAASLGMDVIVTDH
HIPPEERPEAPPAVAVLDPKLWNMEDPLAGVGVAWKLAWAVAREMGDPDGRKHLGRLLDL
VALGTIVDIAPLVGDNRALASMGLKHMNRALEARAARPGLGALVKVAGVRGSLDEGDLGW
KLGPRINSIGRIKHPGPALDLLLTDDSREAMRLAFLLNQMNSDRQQRTRYAVERAMEGVD
PSRTSRSWSPRRGCSAGSRARRRQGRGGDGEAGGRAEPARRRLLRRVGAGGGDGRGPLRR
PPRGSPPPRGVGGHRKAAGLSVKAGAFDAFVAGVNEAVRAQTLEEPEILTPRWRWTRRCR
WRSSPTGCSIGTRGSRRSGAGTTGPSS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
gtgccgctttgtataatgcgagtggtagcttctatttgtcggggaggagacgggttggcg
gagtggcggctcctggagccgggggcggacgttgtcgcggagctcaagcgcgcggcggag
gtggacgagctgtgcgcccgcgtgctggcgaacaggggcgtcgacgccggggccgcgctc
gggttcctctcgccctccctcaaggccatcggggcgccggaggaggaggcgtggcgggtc
gcggcgcgcagggtggcgcgggccgtacgcggcggcgagcggatcgggatcttcggcgac
tacgacaccgatgggatcacctcctccgcggtgctctacctcgcgctctcccggtacacg
aacaacctcgccgtcaagctgccgacccgacagacgggctacgggctgctggagccctac
gtccgggacctcttcgccgacggggtggacctcgtcgtcaccgccgactgcggcatctcc
aacagggcgggggtcgagatcgcggcctcgctggggatggacgtgatcgtgacggaccac
cacatcccgccggaggagaggcccgaggccccgcccgccgtcgcggtcctcgacccgaag
ctctggaacatggaagatcccctggccggcgtcggggtggcgtggaagctcgcgtgggcc
gtggcccgggagatgggggacccggacgggagaaagcacctcgggaggctgctcgacctc
gtggcgctcgggacgatcgtggacatagcgcccctcgtcggggacaaccgggcgctcgcc
tcgatgggcctcaagcacatgaaccgcgccctggaagcccgcgccgcccgcccggggctc
ggggcgctggtgaaggtggcgggggtgcggggctccttggacgagggcgacctcggctgg
aagctcgggccgaggatcaactccatcggcaggataaagcaccccggccccgccctcgac
ctcctcctgacggacgactccagggaggcgatgaggctcgcgttcctccttaaccagatg
aactccgaccgccagcagcgcacccgctacgccgtcgagcgggcgatggagggggtcgac
ccgagcaggacttcaaggtcgtggtcgccgaggaggggatgctcggcgggctcgcgggct
cgtcgccggcaaggtcgcgggggcgacggggaggccggcggccgtgctgaaccggcgcgc
cgacggctcctacggcgggtcggcgcgggcgggggagacggacgtggacctctacggcgc
cctccacgaggttcgccacctcctcggggagtgggcgggcaccgcaaggcggccgggctg
tcggtcaaggccggggccttcgacgctttcgtggccggggtgaacgaggcggtgcgggcg
cagaccctggaggagccggagatcctgacgccccggtggaggtggacgcggaggtgccgc
tggagaagctctccaacgggctgctcgattggcacgagaggatcgcgccgttcgggagcg
ggaaccaccggcccgtcttcgtga
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