Rubrobacter marinus: GBA65_20720
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Entry
GBA65_20720 CDS
T07670
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rmar
Rubrobacter marinus
Pathway
rmar00300
Lysine biosynthesis
rmar00470
D-Amino acid metabolism
rmar01100
Metabolic pathways
rmar01110
Biosynthesis of secondary metabolites
rmar01120
Microbial metabolism in diverse environments
rmar01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rmar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GBA65_20720 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GBA65_20720 (lysA)
Enzymes [BR:
rmar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GBA65_20720 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1979
Motif
Other DBs
NCBI-ProteinID:
QIN80531
UniProt:
A0A6G8Q224
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Position
complement(4101243..4102496)
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AA seq
417 aa
AA seq
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MDDFYYGEGGLRCEGVALAEISESIGSPTYVYSFAALERAYRELEEAFSGLDHLVCYAVK
ANGNLSVLRTLASLGAGADIVSGGELYRAMKAGFDPKKVVFAGVGKTEAEIMAALGERIL
LFNVESASELERLEEIAGRFGKRARVSLRVNPDVDPGTHAHISTGQGESKFGIPIDEALV
LAEKIGRYRCVDLIGVHQHIGSQITKIAPHAEAIEKSAGLVEELKRRGFDIRYFNIGGGL
GIRYRDEEVPSPKEYIDAIRPSLEATGAKILCEMGRYIAGNAGVLLTRVVYRKKSGAKSF
LVADAGMNDLLRPSLYDAHHEVRSVKENGSSSLKADLVGPVCESGDYLARDRELPDAAEG
DLLALMGTGAYGFSMASNYNSRPRAAEVMVKGDRWAVIREREHNADLIKGEVVPAFL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggacgacttctactacggggagggcggcctccgttgcgaaggcgtcgccctcgcggag
atctcggagagcatcggctccccgacttacgtctacagcttcgcggccctggagagggcc
taccgggagctcgaggaggcgttctcgggcctcgaccacctggtctgctacgcggtaaag
gcgaacgggaacctctcggttctgaggaccctggcctccctcggggcgggggcggacatc
gtctccggcggcgagctgtaccgggcgatgaaggccgggttcgacccgaagaaggtggtc
ttcgccggggtcgggaagacggaggccgagatcatggcggccctcggggagcgcatcctg
ctcttcaacgtggagtcggcctccgagctggagcggctcgaggagatcgcggggcgcttc
ggcaagcgggcgcgggtctctttgagggtcaacccggacgtcgacccggggacgcacgcg
cacatctccaccgggcagggcgagagcaagttcggcatccccatcgacgaggcgctcgtc
ctcgccgagaagatcgggcggtacaggtgcgtggaccttataggggtgcaccagcacata
gggtcccagatcaccaagatcgcgccgcacgccgaggccatcgagaagagcgcgggcctc
gtcgaggagctcaagcgccgcggcttcgacatcaggtacttcaacatcggcggggggttg
gggatacgctacagggacgaggaggtcccgtccccgaaggagtacatcgacgccatccgg
ccctccctggaggcgacgggcgcgaagatactgtgcgagatgggccgctacatcgccggt
aacgcgggcgtgctgctgacccgcgtggtctaccgcaagaagagcggcgccaagagcttc
ctcgtcgccgacgccggcatgaacgacctgctgcgcccctccctctacgacgcccaccac
gaggtgcgcagcgtgaaggagaacggttcgagttccctgaaggcggacctggtcgggccg
gtctgcgagtccggcgactacctggcccgcgaccgcgagctccccgacgccgccgagggg
gacctgctcgccctgatggggacgggggcctacggcttctccatggcctcgaactataac
tccaggccgcgcgccgccgaggtgatggtcaagggcgaccgctgggccgtcatccgcgag
cgcgagcacaacgcggacctgatcaagggcgaggtcgtcccggcattcctgtaa
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