Tritonibacter mobilis: K529_008760
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Entry
K529_008760 CDS
T04367
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rmb
Tritonibacter mobilis
Pathway
rmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K529_008760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmb03019
]
K529_008760
Enzymes [BR:
rmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K529_008760
Messenger RNA biogenesis [BR:
rmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K529_008760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
NAT10_TcmA_helicase
ERCC3_RAD25_C
HEM4
DEDD_Tnp_IS110
SUa-2TM
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANP40853
UniProt:
A0A1B1A2P7
LinkDB
All DBs
Position
1828065..1829393
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AA seq
442 aa
AA seq
DB search
MTEFSTMDLPKHLHTRMEAMGFNTPTPIQARAIPHALNGQDVLGLAQTGTGKTAAFGVPL
VAQMLEYGQKPAAGTVRGLILAPTRELANQIAETLKGLTEGSPLKTGLVVGGVSINPQIN
RLSRGTDILVATPGRLLDILDRKALDLGSCDFLVLDEADQMLDLGFIHALRKIAALLPEK
RQTMLFSATMPKQMNEIANAYLKSPVRIEVTPPGKPAAKVTQSVHFIAKAEKLSLLKELL
AKHDGERTLVFGRTKHGMEKLMKVLDKAGFKAAAIHGNKSQGQRERALKAFKSGEITVLV
ATDVAARGLDIPDVKYVYNYELPNVPDAYVHRIGRTARAGKDGQAVAFCAPDEIGDLKAI
QKTMGITIPVASGRAWEELPDPAAKPARGGGRGRPGGGGGRGKGSGKPGGGRRRFGGGKP
EGQPGGGEARNSAGGGGRRRKS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattttccacaatggatctgcccaagcacctgcacacccgcatggaagccatg
ggctttaacactcccacccccattcaggcgcgcgcgattccgcatgccctgaacggtcag
gatgtgctgggtctcgcccagaccggcaccggcaaaactgcggcctttggtgtgccgctg
gtggcgcagatgctggaatatggccaaaagcccgccgccgggaccgtgcgcggtttgatc
cttgccccgacgcgcgagcttgcgaaccagatcgccgaaaccctcaagggtctcaccgaa
ggcagtccgctcaagaccgggctggtggttggcggtgtctccatcaatccgcagatcaac
cgcctgtcccgtggcaccgacattctggtcgccacgcccggacgtctcttggatattctc
gaccgcaaggcgctggatctgggatcttgtgactttctggttctggacgaggctgaccag
atgctggatctcggctttatccacgccctgcgcaagatcgcagcacttctgcccgaaaag
cgccagaccatgctgttctcggctacaatgcccaagcagatgaacgagatcgcaaatgcc
tatctcaagagccccgtgcgcattgaggtgacccctccgggcaagcccgccgccaaagtg
acccagtccgtgcatttcattgccaaggcagagaaactcagccttctgaaggagttgctg
gccaaacatgatggcgagcgtacgctggtctttggccgcaccaaacacggcatggaaaag
ctgatgaaggtgctggacaaggcaggcttcaaggccgccgcgatccacggcaacaaaagt
cagggccagcgcgaacgggcgttgaaggcgttcaaatctggcgagatcaccgttctggtg
gccaccgatgtggcggcgcgcgggctggatattccagatgtgaaatacgtctataactac
gagctgcccaatgtgccggatgcctatgtgcaccggatcggccgcaccgcgcgtgcgggc
aaggatggtcaggccgtggccttctgtgcccccgatgagatcggcgatctgaaagcgatc
cagaaaaccatgggtatcaccattcccgtggcctctggccgcgcctgggaagaactgccc
gatccggccgcgaaacccgcgcgtggtggcggacgtggtcgccccggtggcggtggtggc
cgtggcaaaggcagcggcaagcccggtggcgggcgacgtcgctttggcggtggcaaaccc
gaagggcagcccggtggtggcgaagcccggaactccgctggcggtggcgggcggcggcgc
aaatcttga
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