Tritonibacter mobilis: K529_010005
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Entry
K529_010005 CDS
T04367
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
rmb
Tritonibacter mobilis
Brite
KEGG Orthology (KO) [BR:
rmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmb03019
]
K529_010005
Enzymes [BR:
rmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
K529_010005
Messenger RNA biogenesis [BR:
rmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K529_010005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
ResIII
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ANP41095
UniProt:
A0A1B1A3E6
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All DBs
Position
2102256..2104751
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AA seq
831 aa
AA seq
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MIRLPIDDALPDLIDALRARGRAVLQAPPGAGKTTKVPLAILEAGLTTGRILMLEPRRLA
ARTAAERMASTLGESPGQTVGYRVRGEAKASKSTRIEVVTEGILTRMLQSDPDLPGVGAV
IFDEFHERSLNGDLGLAFCLEVAGALRDDLLLLAMSATLDAGPVAALMDAPIVTSEGRSY
PVETRWLDSPLPAKARKLDALVDLVARAEGETRKTGGGLLVFLPGEGEIRRAASALEARL
PGNCQIRPLFGALPFAEQRAAIAPVSEGRKVVLATSIAETSLTIEDIRVVVDMGQARRAR
FDPGAGMSRLVTERVTRAEATQRQGRAGRVAEGTCYRLWSKGEEGALMAYPRAEIEAADL
TGLALELALWGAEPADLPLLTQPPAGSLSEARALLQMLGALDGQMRITDHGRALARLPLH
PRLAHMLAVAGPESAALAALMADRDPLRGAPVDLALRLEALRDLRRFRDRRPYQVKTPAL
QAITSEAKRLRRQRGGQSDASTSAAGRPAAAATSEPLSAAAMAALAYPDRVAQRRKGDDA
RYVLSGGKGAVLENSDPLAAASYLVVTDSDGNPREAKIRLAAQITLAEIRALFADQIHWQ
DLCSWSKRDRRVVARKQERFGALVLDDRIWKDVPPEATATAMLDGVRDLGLRLSPAAARL
ATRVELLRAEGHDLPDFSEAGLMATLEDWLLPMLTGMRTDADWKGFDALPALRAALTWEQ
TQLLDREVPGSFVTPLGRKIPIDYASDTPGIEVRLQEMFGVTRHPTVAGVALKVTLLSPA
RRPIQITRDLPGFWSGSYADVRKDMRAQYPKHPWPEDPTQAEATLRARPRK
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgataaggctcccgattgatgacgcgctccccgacctgattgatgctctgcgcgcgcgg
ggccgcgcggtgctgcaagcgccccccggcgcgggcaagaccaccaaggtgccgcttgcg
atccttgaggcaggcttgaccaccgggcgcatcctgatgctggagccccgccgcctcgcc
gcccgcacagcggcagagcgcatggcgtcaaccctgggagaaagccccggtcagaccgtc
ggctaccgggtgcgcggcgaggccaaggcctcaaaatccacccgcatcgaggttgtcacc
gaaggcatcctgacccggatgctgcaatcggacccggacttgccgggcgtcggcgcggtg
atcttcgacgaatttcacgaacgctccctcaatggcgatctggggctcgccttctgtctg
gaggttgcaggtgccctgcgcgacgacctcttgctgctggcgatgtccgccacgctggat
gcaggcccggtggcggccttgatggatgcgcccatcgtgacctccgagggccgcagctac
ccggtcgaaacccgctggctcgacagccccctgcccgccaaggcacgcaagctggacgcg
ctggtggatctggtcgcccgcgcggaaggggagacccgcaaaaccggcgggggccttttg
gtgttcctgcccggcgagggcgaaatccgccgcgccgccagcgcgctggaggcccgtctg
cccgggaattgccaaatccgtccgctgtttggcgccctcccctttgccgaacaacgcgcc
gccatcgcccccgtctccgaggggcgcaaggtggtgctggcgacctccatcgccgaaacc
tccctgacgatcgaggacatccgcgtcgtggtggatatgggacaggcccggcgcgcccgg
ttcgaccccggtgctggcatgtcgcggctggtgacagaacgcgtgacccgcgccgaagcc
actcagcggcagggccgcgccggtcgcgtggccgagggcacttgctatcggctctggtcc
aagggcgaagagggcgcgctgatggcctacccccgggccgagatcgaggccgcagacctc
accggtctggcgctggaactggcgctttggggcgcggagcctgcggatctgccgttgctg
acccagccccctgccggtagcctgtccgaggcgcgtgccctgttgcagatgctcggcgcg
ctggatgggcagatgcggatcaccgaccatggccgcgcgctggcccgcctgcccctgcac
ccgcgtctggcgcatatgctggcagtggcgggaccggagagcgccgcactggcggcgctg
atggcggaccgcgacccgttgcgcggcgcgccggtcgatctggcgctgcgtcttgaggcc
ctgcgggatctgcgccgcttccgcgaccgccgcccctatcaggtcaagacccccgctctg
caggcgatcaccagcgaggcaaagcgcctgcgccggcaacgcggcgggcagagcgacgct
tcgaccagcgccgcgggcagacccgccgccgccgccacatcagagccgctctctgcggcg
gccatggccgcgctggcctatccggatcgggtggcgcagcgccgcaagggcgatgacgcc
cgctatgtgctctctggtggcaagggcgcggtgctggaaaactccgacccgctggccgcg
gcctcctaccttgttgtgaccgacagcgacggcaatccgcgcgaggccaagatccgcctt
gcggcgcagataaccctggccgaaatccgcgcgttgtttgcagatcagatccactggcag
gatctctgcagctggtccaaacgcgaccgccgcgtggtggcgcgcaaacaggaacgcttt
ggcgcgctggtgctggacgaccgcatctggaaggacgtcccgcccgaggccaccgccacc
gccatgctcgacggtgtgcgtgacctcggcctgcgcctgtcgcccgccgccgcgcggctt
gccacccgtgtcgaactgctgcgcgccgaaggccacgacctgccggatttctccgaggcg
ggcctgatggcaactctcgaggactggctgctgcccatgctaacgggcatgcgcacggac
gctgattggaagggttttgacgcgctcccggccctgcgcgccgcgctgacgtgggaacag
acccagctccttgaccgcgaggttccgggcagtttcgtgacaccgcttgggcgcaagatc
cccattgactacgccagcgacacgccggggatcgaggtccgcctgcaggagatgttcggc
gtcacccgccatcccaccgtcgcgggtgtggcactgaaggtcacgctcttgtcgccagcc
cgtcgcccgatccagatcacccgcgatctgccgggattctggtccggctcctacgccgat
gtgcgcaaggacatgcgcgcgcagtaccccaaacacccctggcccgaagatcccactcaa
gccgaagcaaccctgcgcgcccgcccgcgcaagtga
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