Tritonibacter mobilis: K529_010440
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Entry
K529_010440 CDS
T04367
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rmb
Tritonibacter mobilis
Pathway
rmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K529_010440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmb03019
]
K529_010440
03009 Ribosome biogenesis [BR:
rmb03009
]
K529_010440
Enzymes [BR:
rmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K529_010440
Messenger RNA biogenesis [BR:
rmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K529_010440
Ribosome biogenesis [BR:
rmb03009
]
Prokaryotic type
rRNA helicases
K529_010440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Extensin_1
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANP41182
UniProt:
A0A1B1A3N0
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All DBs
Position
2193444..2195483
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AA seq
679 aa
AA seq
DB search
MIPTLQQALERRGYTSLTPVQEAVSDPELAGADLLVSAQTGSGKTVGFGLAIAPTILNED
GQFERAASPLALVIAPTRELALQVKRELSWLYGDAGAVLASCVGGMDMRDERRALERGAH
IVVATPGRLRDHITRGSIDLSGVAAVVLDEADEMLDLGFREDLEFILEETPEDRQTLLFS
ATVSKPIAALAQTYQNDAQRISTINKSEQHSDISYFSHVVAPHDIENAIINVLRFHEAPN
AIVFANTRAAVNRLLTRLSNRGFQVVALSGELSQSERAGALQAMRDGRARICVATDVAAR
GIDLPNLDLVVHADLPSSHETLLHRSGRTGRAGRKGTSALMVTPRSVRKAERLLRDAKLS
AEWVDAPSAEEVRGRDMERMLSDAVWTEEAPESQAETLAKLVESFSPEQLAAGYLRLWSA
ARSAPEELTDVASVDARKKKEDRAPFGPSVWFAIEGGRDAGADPRRLLPMLCKAGGIDKT
AIGAIRIVGDKSYAEIAEDKVEGFMATLGGDMALDDGSALERLNEAPNLPERSKPPFRKG
GGRGGFGGSKPGYKGERKGGGDYSSDRKPYRGRDDAADRPVKPRPAKPRPAGDKPAYDKP
RGERSEKGKFDKPRGDKPRGDKPKFDKPRADKPRGDKPKFEKPKGPPPPKGKPSSKKNKA
RRSDASNTSKRFTPPGRKG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
ttgatacccaccttgcagcaggcgctggagcgccgtggttacacgtctctcacccctgtt
caggaggcggtctcggacccggaactggcaggtgcggatcttttggtgtccgcccaaacc
ggttcaggtaaaacagttggcttcggcctcgccattgcacctaccattctgaatgaggac
ggtcagttcgaacgtgccgccagtccgttggctctggttatcgcccccacccgcgaactg
gcgctgcaagtaaagcgcgagctgagctggctttatggcgatgcaggcgcagttctggcc
tcttgcgtgggtgggatggatatgcgcgacgagcgccgtgcgcttgaacgtggggcgcat
atcgttgtcgccacaccgggccgtttgcgcgatcacatcactcgtggctccatcgatctg
agtggcgtggccgccgtggttctggatgaggcggacgagatgcttgatctcgggttccgc
gaggatctggagttcattctcgaagagaccccggaagatcgccagaccctgctgttttcg
gccaccgtgtcaaagccgatcgccgcgctggcgcagacctatcaaaatgacgcgcaacgg
atttcaacaatcaacaagtccgagcagcacagcgatatttcctatttctctcatgtggtt
gccccccatgatatcgagaatgcgatcatcaacgtcctgcggtttcacgaggctcctaac
gccatcgtttttgccaatacccgtgccgcagtgaaccgcttgctgacccgtctgtcgaac
cgcggttttcaagttgtggcattgtctggcgagttgtcgcaatccgaacgcgcaggcgct
ttgcaggccatgcgtgacgggcgtgcccgaatctgcgtcgcaaccgatgtggcagcacgc
ggcatcgacctgccgaacctcgatctggtagtgcatgctgatctgccgtcgagccatgaa
accctgttgcaccggtctggccgcactggccgcgcgggccgcaagggtacaagtgccctg
atggtgacgccgcgttccgtacgcaaagcagagcgcctgctgcgcgatgccaaactgtca
gcggaatgggtcgatgcgccctccgccgaagaggtgcgtggccgcgacatggagcggatg
ctgtccgacgctgtctggaccgaagaggcccccgaaagccaggcggaaacgctggctaaa
ctggtcgagagcttctcgcccgagcagctggccgctggctatctgcgcctgtggtccgcc
gcccgctccgcgccggaagagctgaccgatgtggcctcggtggatgcccgcaagaaaaaa
gaagaccgcgcgccctttgggccgtcagtctggttcgccattgagggcggtcgggacgcc
ggcgcagatccgcgccgcctgttgccgatgctgtgcaaggccggtggcattgataaaact
gctattggtgccattcgcatcgtcggcgacaaaagctatgccgagattgccgaagacaag
gtcgaaggtttcatggcaaccctcggtggtgacatggcgctggatgatggctccgcactt
gagcgcctgaacgaggccccgaacctgcctgagcgcagcaagcctccgttccgcaagggc
ggtgggcgcggcggctttggcggtagcaagcccggatataagggcgaacgcaaaggtggg
ggcgactactccagcgaccgcaaaccctatcgcggtcgcgatgacgctgctgaccggccc
gtgaaaccccgcccggccaagccccgtcccgctggtgacaaaccggcctatgacaagcca
cgtggtgagcgttccgaaaagggcaaatttgacaaaccacgtggggacaagccgcgcggc
gacaaacctaaattcgacaagccccgtgcagataaacctcgtggggacaagccgaagttc
gaaaaacccaaaggtccgccgcccccaaaaggtaaaccaagcagcaaaaagaacaaagcc
cgccgctctgatgcgtccaacacatctaagcgcttcacccctccgggtcgaaaagggtaa
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