Tritonibacter mobilis: K529_015415
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Entry
K529_015415 CDS
T04367
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rmb
Tritonibacter mobilis
Pathway
rmb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K529_015415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmb03400
]
K529_015415
Enzymes [BR:
rmb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K529_015415
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K529_015415
DNA repair and recombination proteins [BR:
rmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K529_015415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ANP42167
UniProt:
A0A1B1A6N1
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All DBs
Position
3257890..3258741
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AA seq
283 aa
AA seq
DB search
MPELPEVETVMRGLQPSMEGEVITRADVNRPDLRWPFPERMADRLSGRRVLSMRRRSKYI
LADLDSGETLLVHLGMSGRMTVSGDPLGQFVHAHPQIAKHDHVVFHMENGARVTFNDPRR
FGAMDLLNTATADSHKLLAVLGPEPLGNDFHENHLVTAFKGRKTPVKSALLDQGIIAGLG
NIYVCETLFRAGISPRREVGKISAPRVAALVPIIRQVLLDAIAAGGSSLKDFRQANGELG
YFQHTFDVYGREGEPCRRAGCGGTVTRITQSGRSSFYCGKCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcccgaggtcgagacggtgatgcggggcctgcaaccctctatggagggg
gaagtcattacccgcgccgatgtgaaccggcccgatttgcgctggccttttccggaacgt
atggcggaccggctatcaggacgcagggtgctgtcgatgcgacggcggtcgaaatacatc
cttgctgaccttgatagcggcgagacgcttttggttcaccttggtatgtcaggtcggatg
acggtatcgggtgacccgcttggccagtttgtgcatgcgcatccgcaaatcgccaaacat
gatcatgtggtctttcacatggaaaatggcgcgcgggtcacttttaatgatcctcgccgc
tttggtgcgatggacctgctgaatacggcgacagccgacagtcacaagctgcttgcggtg
ctgggaccggagcctttggggaacgatttccatgaaaatcaccttgtcacagccttcaag
ggccgcaagacgcccgtgaaatctgcactgctcgatcagggaatcatcgctggccttggc
aatatctatgtctgtgagacgcttttccgtgcgggcatttcgccacgtcgcgaagttgga
aaaattagcgcgccacgcgttgccgcgctggttcctatcattcgtcaagtgttgctagac
gcgattgcagcgggcggatcttcgctcaaggattttcgccaagccaatggcgaacttgga
tattttcaacatacctttgatgtttacgggcgcgaaggagagccttgccgacgggctggc
tgtggggggacggtcactcgaatcacccaatccgggcggtcgtccttctactgtggcaag
tgccaaagatag
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