Rickettsia monacensis: RMONA_04105
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Entry
RMONA_04105 CDS
T03824
Symbol
rne
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
rmc
Rickettsia monacensis
Pathway
rmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RMONA_04105 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmc03019
]
RMONA_04105 (rne)
03009 Ribosome biogenesis [BR:
rmc03009
]
RMONA_04105 (rne)
Enzymes [BR:
rmc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
RMONA_04105 (rne)
Messenger RNA biogenesis [BR:
rmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RMONA_04105 (rne)
Ribosome biogenesis [BR:
rmc03009
]
Prokaryotic type
rRNA processing factors
RMONA_04105 (rne)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CEO17207
UniProt:
A0A0B7IZ69
LinkDB
All DBs
Position
664134..666206
Genome browser
AA seq
690 aa
AA seq
DB search
MNKKIIIDANFPSETRVVLLGQSNNIEDIEFQTTVRQQNKGNIYLAKVTRIEPSLQAVFI
EYGMDKSGFLPFSEIHPNYYNLPASERNFPVNAFPEIALSNITVEDDKEKPAAIYDSLVD
SEEIDLKTIEDLVESKFHSELNLEAADDIEIIQSDTSESNIPQYKQYKVQEVIRKNQILL
VQVAKEERGNKCAAFTTYISLAGKYCVLMPNKGSQNGISRKISNGEERKRLKDILNKIVS
GDKNAYSIIVRTAGRGSSTLDLKKDYNYLARLWNKIRKSTIKFPAPCFIHEEDSIIRKTI
RDMCDHNVKEVVIQGQEAYEDASKFMQDLLPSELSKLKEHKNKTPIFTKFQVEEQLVKLY
QPVVTLPSGGYIVINPTEALISIDVNSGKSTSEKNIEETALKTNLEAAKEVAKQVKLRDL
SGLIVVDFIDMSEAKNRKVIERSFKEFLSHDRARIQTGNISQFGLLEFSRQRLRSSFLET
NSAICSHCNGKGVIRASYANAMLILRTIENEIFEERIDVINVFTNIVSVIYLLNNKRAEI
KFIEEKYNIKLNFYSDPNATSDSYSIEKVKLLKKNNNNVNPVKPVIQNHSADYTEEEPKK
EQLRKNKHKWKTANNSNNIANEVKDKSLEAKEPVEQTVSVVEEVKVVESNAGLEEAQAAP
KKTKRRYRNKKSNKKCPVNTAEDTEKNVES
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagattataattgatgctaattttccaagcgaaacaagagtagttttatta
ggacaaagcaacaatatagaagatattgaatttcaaacaaccgtaagacaacaaaataaa
ggtaatatttatttagcaaaagtcacaagaatagagccgtcgctacaagctgtttttata
gagtatggaatggataaaagtggatttttaccgtttagtgaaatccatcctaactactac
aatttgcctgcctcggagagaaattttccggttaatgcttttcctgaaatagctctttca
aatattacggttgaggatgataaagagaaaccggcagctatatatgattctttagttgat
agtgaagaaattgacctaaaaaccatagaagatttagtagagagtaaattccattcagaa
cttaatttagaagcagctgatgatattgaaattattcaaagcgacacctctgagtcaaat
attccgcaatataaacaatataaagttcaagaagtaataagaaaaaaccaaatattattg
gtgcaggttgctaaggaagaacgaggaaataagtgtgccgcttttactacttatatatcc
ttggctggtaaatattgtgttttaatgcctaataaaggttcacaaaacggcatatcgcgt
aaaatatcaaacggggaagaaagaaaaagactgaaagatattttaaataaaatagtaagt
ggtgacaaaaatgcttatagtatcattgttagaaccgcaggtagaggaagtagcacctta
gatttaaagaaagactataattatttagcaaggttatggaataaaattcgtaaaagtact
attaaatttccagctccgtgttttattcatgaggaagatagtataatacgtaaaaccata
cgtgatatgtgtgatcacaatgttaaagaagtagtgattcaaggacaggaagcatatgaa
gatgcttcaaaatttatgcaggatttattaccttcagagctttcaaaacttaaagaacat
aaaaataaaactcctatatttactaagtttcaagtagaagagcaattagttaaattatat
cagcctgtcgtgacactaccttcagggggatatatcgttattaatcctacggaagctctt
atttcaattgatgtaaattccggtaaatcaacttctgaaaaaaatatcgaagaaacggca
ctaaaaactaatttagaagcagccaaagaagtagcaaagcaagtaaagcttagagatcta
tcaggtttgatagttgttgattttatagacatgagcgaagctaagaatcgtaaagttatt
gaacgatcctttaaagagtttttaagtcatgatcgtgctcgtatacaaaccggtaatatt
agtcagtttggactacttgaattctcaaggcagagattacgttcttctttcttagaaact
aattcggcaatttgttctcattgtaacggtaaaggagtcattagagcgagttacgctaat
gctatgttaattttacgtactatagagaatgaaatttttgaagaaagaattgatgtaata
aatgtttttaccaatatcgtttcagttatttatctacttaataataaacgtgctgaaata
aaatttattgaagaaaaatataatataaagcttaatttttattccgatcctaatgctaca
tcagatagttattcgattgaaaaagtgaagttgttgaagaaaaataacaataatgttaat
cctgttaagccggtaattcagaatcatagtgccgattatactgaagaagagccgaaaaaa
gaacagttacgcaaaaataaacataaatggaaaacagctaataatagtaataatattgct
aatgaagtaaaagataagagtttagaggcaaaagaaccggtagagcaaaccgtaagcgtt
gtggaagaggtgaaagttgtagaaagtaatgccggcttagaagaagcacaagctgctcca
aaaaagacaaaacgtagatatcgtaataaaaaatcaaataagaaatgtcctgttaatacc
gccgaagatacggaaaagaatgtagagtcttga
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