KEGG   Rhopalosiphum maidis (corn leaf aphid): 113547910
Entry
113547910         CDS       T06065                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113547910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rmd03019]
    113547910
Messenger RNA biogenesis [BR:rmd03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     113547910
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     113547910
SSDB
Motif
Pfam: ECR1_N EXOSC1 RRP4_S1 ECR1_N_2 DUF7552
Other DBs
NCBI-GeneID: 113547910
NCBI-ProteinID: XP_026804294
LinkDB
Position
1:complement(36227227..36229664)
AA seq 195 aa
MENKIVCVPGQRLCRLDSTHTLGKGTYKRQDYIYSSLAGIVNVDNTNNKVSVVEVRSKDQ
TIVPAPGDIVTAMVTTLNQDMCKCLITSVCGHELNETYRSSLRRQDVRMKEIDKIDMLQC
FRPGDIILARILPMTEAHTFKLTTAENELGVVIACSEYGHPMTPISWTEMKCTKTSVVEY
RKVAKIVQDNAGEDI
NT seq 588 nt   +upstreamnt  +downstreamnt
atggagaacaaaatagtttgtgtaccgggacaacggctctgtcgactagattccacacac
actttaggtaaagggacgtataaaagacaagattacatttattcaagtttggctggaatt
gtgaatgtagataacacaaataataaagtatcagttgttgaagttcgaagtaaagatcaa
actattgttccagctcctggagatattgtaacagcaatggtgactacattaaatcaagat
atgtgcaagtgtcttattaccagtgtttgtggacacgagctgaatgaaacatacaggagt
agtcttagaagacaagatgtgcgcatgaaagaaattgataaaatcgatatgctacagtgt
tttagaccaggagatataatattggctagaatcttgccaatgactgaagctcataccttt
aaactaaccactgctgaaaatgaacttggtgtagtcattgcatgcagtgaatatggccat
ccaatgactcctattagttggactgaaatgaaatgtacaaaaacaagtgtagtagaatac
cgaaaagtagctaaaattgttcaagacaatgcaggagaagatatttaa

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