Rhopalosiphum maidis (corn leaf aphid): 113547910
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Entry
113547910 CDS
T06065
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113547910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113547910
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113547910
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113547910
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ECR1_N_2
DUF7552
Motif
Other DBs
NCBI-GeneID:
113547910
NCBI-ProteinID:
XP_026804294
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All DBs
Position
1:complement(36227227..36229664)
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AA seq
195 aa
AA seq
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MENKIVCVPGQRLCRLDSTHTLGKGTYKRQDYIYSSLAGIVNVDNTNNKVSVVEVRSKDQ
TIVPAPGDIVTAMVTTLNQDMCKCLITSVCGHELNETYRSSLRRQDVRMKEIDKIDMLQC
FRPGDIILARILPMTEAHTFKLTTAENELGVVIACSEYGHPMTPISWTEMKCTKTSVVEY
RKVAKIVQDNAGEDI
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaaaatagtttgtgtaccgggacaacggctctgtcgactagattccacacac
actttaggtaaagggacgtataaaagacaagattacatttattcaagtttggctggaatt
gtgaatgtagataacacaaataataaagtatcagttgttgaagttcgaagtaaagatcaa
actattgttccagctcctggagatattgtaacagcaatggtgactacattaaatcaagat
atgtgcaagtgtcttattaccagtgtttgtggacacgagctgaatgaaacatacaggagt
agtcttagaagacaagatgtgcgcatgaaagaaattgataaaatcgatatgctacagtgt
tttagaccaggagatataatattggctagaatcttgccaatgactgaagctcataccttt
aaactaaccactgctgaaaatgaacttggtgtagtcattgcatgcagtgaatatggccat
ccaatgactcctattagttggactgaaatgaaatgtacaaaaacaagtgtagtagaatac
cgaaaagtagctaaaattgttcaagacaatgcaggagaagatatttaa
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