Rhopalosiphum maidis (corn leaf aphid): 113547950
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Entry
113547950 CDS
T06065
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
rmd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113547950
03015 mRNA surveillance pathway
113547950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113547950
03041 Spliceosome [BR:
rmd03041
]
113547950
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113547950
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
113547950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
113547950
NCBI-ProteinID:
XP_026804351
LinkDB
All DBs
Position
1:complement(68812620..68823694)
Genome browser
AA seq
737 aa
AA seq
DB search
MYTGTSADQDTRFSDKEKKLLKQMKFSESLNAKVDMNKVKLDTIKPWIGKRITELLGMED
DVVEEFVNNQLEADTWPDPRKMQINLTGFLNGKNARVFMTDLWELLLSAQESPSGIPPKF
IEQKKEELKKKMEDQERVGDMIKKFEKDKEDREKERKKDRERRKSRSRSHTRDRRSRSRD
RHRDKRDKEKERDKYKDHDSDKVREKHTKRDSRSKSKGKLVSNGHSSPAKTKKEKSRSCS
PKNDVTISEEKTNLKNSVSPTKDKVVETNNKPKPKERSLSRDSTKRREKKRHHSSSSSRS
SSSSNSSLSPDRKKDFEIQKKENSIQKKRQYRTNKDESSGSESDKDKSTDRRDRRDRSSS
RSRRPSRHAFNRGRYREKSRDRYYRDRERERARERERNRRDRERERRDRERAIRERDRER
DRRRQREREEKSSPRRRKSRSPERKSRSGSRHTRSRSKSKRRPSGKSRSRERTVKDSSIV
SPTKKDNTSKSKASQESLSRTPSPFKKVEDKTERKPVKDRLGVRDEQHSKSSQPQRSKGQ
SPSSEKKNNNDKKNSSSSRRKSSTSPVIKKKEEEKPEKVKKPLKKSDVSDAENAKSNKKK
DEESSSSDESLKKSKKKIKRDSSSDDDKKTKKRKLKDSTSSEDEDSKKKKKRKRRSSSSS
SDESDRDDKKKKKDKKHKKHKKHKKHKKHKKRKTEESGSDVKSGDESEQRLREKALRTMK
KKNQAKHDGTPNSNSSD
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgggtactagcgctgatcaagatactagattcagtgacaaagaaaaaaagctt
ttgaaacaaatgaaatttagtgaatctttaaacgctaaggttgatatgaataaagtaaag
ctagatactatcaaaccttggattggtaaaagaataacagaattgctaggaatggaagat
gatgttgtagaagaatttgtgaacaatcagcttgaagcagatacttggcccgatccaaga
aaaatgcaaataaatcttactggtttcttgaatggcaaaaatgctcgagtgtttatgaca
gacttatgggagttacttttgtctgcacaggaatctccatcgggcattccccctaaattt
attgagcaaaaaaaagaagaattaaaaaagaaaatggaagatcaagagcgagtaggcgat
atgattaagaagtttgaaaaagacaaagaagacagagaaaaagaaagaaaaaaagataga
gaaagaagaaaaagtcgtagtagatcacatacacgagatcgtcgtagtcgatctagagat
cgccatcgtgataaacgagataaagaaaaggaaagagataaatataaagatcatgattca
gataaagttcgagagaagcatacaaaaagagattctcgttcaaaatcaaaagggaaactc
gtgagtaatggacatagttcaccagctaaaactaaaaaagaaaaaagtcgaagttgttcg
cctaaaaatgatgttacaatatctgaagaaaaaaccaacttaaaaaattcagtttcgcct
actaaagataaagttgtagaaacaaataataaacctaaacctaaagaacgatcattatct
agagattctactaaacgtagagagaaaaaacgtcatcattcttcgtcatcaagtcgtagt
tcatcatcatctaattcatctttaagtcctgaccgtaaaaaagattttgagattcagaaa
aaagaaaacagtatccaaaaaaaaaggcaataccgaacaaataaagatgaatcctctggt
agtgaatcagacaaagataaatctacagatagaagagatcgccgtgatcgttcatcttct
cggtcaagacgtccatctagacatgctttcaatcgtggccgttaccgtgaaaaaagtcgt
gatcgttattacagagatagagagagagaaagagcgagagaaagagaacgaaatcggcgt
gatcgtgagcgagaacgtagagatagagaaagagcaattcgtgaaagagaccgtgaacgt
gatagacgtaggcaaagagaaagagaagaaaaatcatcacctcgaagaagaaaatccaga
agtcctgaaagaaaatctagatcaggcagcagacatactagatctcgttcaaaatctaaa
aggagaccaagtggaaaatcacgtagcagagaacgcacggttaaagattctagcattgtt
tctcccacaaaaaaagataacacctcaaaatcaaaggcttctcaagaaagtttatctaga
accccttcaccttttaagaaagttgaagataagacagaacgtaaaccagtaaaagataga
ttgggtgttagagatgaacaacattctaaatcttctcagcctcaaagatcaaaaggacaa
tctccttcatcagaaaagaaaaacaataatgataaaaaaaattcatctagttctagacga
aaatcatcaacatctcctgttattaaaaagaaagaagaagaaaaacctgaaaaagtaaaa
aaacctttgaaaaaatctgatgtttctgatgctgaaaacgcaaaaagtaataaaaaaaaa
gatgaagaatcaagttcgtcagatgaatcgttaaaaaagtctaaaaagaaaattaaaaga
gattctagttcagatgatgataaaaaaactaaaaaacgaaaactaaaggattctacttca
tctgaagatgaagattctaagaaaaaaaagaaacgtaaaagaagatcgtccagttctagt
tcagatgaaagtgatagagatgacaaaaaaaagaaaaaagataagaaacataaaaaacac
aagaagcataagaaacataaaaaacataagaaacgcaaaactgaagaaagtggctctgat
gtcaagtctggagatgaatcagaacaacgtttaagagaaaaggcattgcgtacgatgaaa
aagaaaaatcaagctaaacatgatggaacccctaatagtaatagcagtgattaa
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